Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2127 ATGAGTGAAGACCTGAAGAAAACTGCCTCTAATGGCCATGTGAAAATGTTAATACCTGAAGAACAGCAGGGAAAGATCAATGAGGTGAAAAAGCTAATAGGGCCACTGTCCGGTAAGGCATTGGTTTATTGTTCTGATGCATCGATCTCAAGGTATTTAAGGGCACGGAGTTGGAATGTCAAGAAGGCAGCTAAAATGTTGAAGCAGACCCTTAAATGGAGAGCAGAGTATAAACCAGAAGAGATCCGCTGGGAAGATGTTGCTGAAGAAGCAGAAACCGGAAAGATCTACAGATCAAATTATACTGACAAGCATGGGAGAACAGTACTTGTAATGAGACCTGCTCGTCAGAACTCGAAGACTACAAAAGGACAAATTAAGTATTTGGTGTACTGCATGGAGAATGCTATTCTAAATCTTTCACCGGAACAGGAACAGATGGTCTGGCTGGTTGATTTCCAGGGTTTCAATATGTCACATATATCTATCAAAGTGACACGCGAAACTGCTCATGTATTACAAGAGCATTATCCTGAACGGCTGGGTCTGGCAATACTGTACAATCCACCTAAAATCTTTGAACCATTCTTCACGATGGTGAAGCCTATATTAGATACCAAGACTTATAACAAAGTCAAGTTTTGTTATTCTGATGATCAGAACACCAAGAAGATTATGGAGAATTTATTTGATTTGGACCATCTTGAATCTGCATTCGATGGTAACGAGAATACACCATTTGACATAAATAAATATGCCGAGAGAATGAAAGAGGATGACAAGAAGATTCCATCTTTCTGGACAAGGGAAATCTCTCCATCCTCAGTTGCAACTGATGTTCCTTCTTTGGATTCGATTAAACTAGACACAGATTCCGATGCCTCTGACAATGAGAAAATAGTCCGTTCTTCTGACTCAGTGACGAACACCGGCTTAATGGACCCTGATCAAAATTCGGTTAATCATGAGGATCGGAATGTGAGTGCTGCTGTGCATTAG 999 0.4074 MSEDLKKTASNGHVKMLIPEEQQGKINEVKKLIGPLSGKALVYCSDASISRYLRARSWNVKKAAKMLKQTLKWRAEYKPEEIRWEDVAEEAETGKIYRSNYTDKHGRTVLVMRPARQNSKTTKGQIKYLVYCMENAILNLSPEQEQMVWLVDFQGFNMSHISIKVTRETAHVLQEHYPERLGLAILYNPPKIFEPFFTMVKPILDTKTYNKVKFCYSDDQNTKKIMENLFDLDHLESAFDGNENTPFDINKYAERMKEDDKKIPSFWTREISPSSVATDVPSLDSIKLDTDSDASDNEKIVRSSDSVTNTGLMDPDQNSVNHEDRNVSAAVH* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2127 332 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 304 - -
Mtr5g2127 332 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Mtr5g2127 332 PANTHER GH16843P 1 304 - -
Mtr5g2127 332 CDD SEC14 92 242 IPR001251 -
Mtr5g2127 332 SMART sec14_4 90 244 IPR001251 -
Mtr5g2127 332 Gene3D - 1 272 IPR036865 -
Mtr5g2127 332 SUPERFAMILY CRAL/TRIO N-terminal domain 19 86 IPR036273 -
Mtr5g2127 332 MobiDBLite consensus disorder prediction 285 332 - -
Mtr5g2127 332 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Mtr5g2127 332 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Mtr5g2127 332 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Mtr5g2127 332 MobiDBLite consensus disorder prediction 301 325 - -
Mtr5g2127 332 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2127 Mtr-Chr5 27424482 27428960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2127 - - gmx:100777106 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2127 5 27424482 27428960 Mtr5g2127 5 27424482 27428960 ECH
Mtr5g2127 5 27424482 27428960 Mtr3g2317 3 36902025 36904134 PCT