Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2103 ATGGAAGATAAAGAGCTTGATGAGAGTAATGAGGCAAGTGTTCGAGCTGTTTCAAAGCTAGAAGGAGATGGTTTTGCGAGTCAGGATGAAGATTCTGACAAACAATCCGAGGAGGAGAAAATGCCAAATATTGGCCATGATGATGCCGAGTTTTGCAATGAACAAGATGATGTATCACCAAAATCGTTAAGTTCTCAAGATGATGAAAAAGTGGAAGGAGATGCTTATGTTGTTCAGAATAAAGACCATGGAGAATTGAGACAGGAGAAAATTCAAGATAATTCTCATGATGGCTCCAACAATGAAAATGAACATGATAGATCATCAGATATGTCAAGTACTCAAGGCGTTGAAAATATGGAAGGAGATACTTATGTTGTTCAAAATGAAGATCACGATGGTTCCAAGTATGAGAATGAACATGCTGAAAAGTTATCAGGCTCGTCAAGTTCTGAAGATGTTGAAAATATGGAAAGAAATGTTTGTGTTGTTCAGAATGAAGATCACGAAGAATCAAAACAGGCAACAAGTCAAAATATTTGTCACAATGGCCACGAGTATGAGAATGAACAAGATGATATATCATCAGAAAAGTCAAGTTCTTCAGATGTTAAAAATGTGAAAGAAGATACTTATGTTGTTCAGAATGATGATCACATAGAATCAAAACCCGATAAAAGTCAAAATAATTCTCCAGATGTCCATAAGCATGAGAATGAAGTAGATGATGATAAATCATCAAAAACATCAAATTCTCAAGATTTTGAAAATCGAGGAGATACTCTTGATATTGACAACGAAGATCACGAAGAATCAAAACAGGCAAAAAGTCACAATATTTCTCATGATGGCCTCAAGTACGGGAATGAACAAAGTGATATATCATCACACTCATCACCTTCCCAAGATGTTGAAAATCTAAAAGTAGATACTTATGTTGTTCAGAATGAAGATCAAGAAGAATCAGATAAAGTAAGAAGTGAAAATATTTCTCATGATGGCTCTAAGTATGATAATGAACAAGACGACTTATCGTCAGACACATCAAGTTTTGAAACTATTGAAATGCAGAAGAGTGATGCATGTACCATTCACAACGAAGATTACAACAAAGATCCAAACGAAGAAAAATTTGAAAATCTTGGTTATGATGGTCCCGGGTTTGAGAAAAGGGTAGATGATATATTAGAAAATATATACGGGAATATAGATGAAGATAAAACTTCAAATGAGAGCAAAACTATAAATCCTATAGTTGATGTAGATCCGGGGACTCCACATGTTGTTGAGAAGGCTCTAGCACTTAGAAACTTTGTGAGAGAGAAAAGTTTAGTAGCAGTCTCCACTCTGATGCGTCGACTTTCTAGAAAAGTTGATGAAGATAATTCTGATAATAAAGGTAACGATGTTTCAGATTTATCAAGAGACGGTGAATCCAAAGAAGTAGGTGCAGAAAATAAAACTGATAAGGGGGAGGAACCAATAACTGAAAGTCCTCTGCAACCCATAGTCATGAAAGGAAGAATCATACTATACACGAGACTAGGATGCCGAGAAACTAAAGAGGTTAGGAAATTTTTGTACATGAAAAGGCTTAGATATGTTGAAATCAACATTGATGTGTACCCTAATAGAAAGATAGAGCTGGAGAAGGTTTCAGGATCTACTTCTGTTCCCATAGTTTTTTTCAATGAAGTACTTATAGGAGACTTGAGTAAGCTAGAGGCTCTAAATGAGTCTGGCAAACTTGATGAGAAAATTGAATTCATTATAGCCGAATCACCTTCATTTGAAGCACCAGTTCCACCACTCTCCGGAGAGGATGATGTATCTACTAGTGGACCAATTGATGAAATGGCCCTCATTGTCCGCAAAATGAAGGAATCTATCGTTGTGAAGGATAGATTTAGCAAATTGAGAAGGTTCACTAATTGCTTTCTCGGCTGTGAAGCTGTGGACTTCTTATCAGAAAATCAATATTTGGAAAGGAAAGAGGCAGTTGAGTTTGGACGAAAGCTTGCTATTCAGCTCTTCTTTCAACATGTTCTTGATGAGAATATATTTGAGGATGGTAATTTCTTATATCGGTTTTTGGATGACGATCCAATTGTGGCATCTCAGTGTCAAAATATTCCAAAGGGTATAACTACTGTGAAACCTAAGCCTATCAAAGAAATTGCATCAAGGCTGAGATTATTGTCCTATGCAATGTTTGAAGCCTATGCATCCGAAGATGGACGTCATGTTGATTACAGAAGTATGCATGGAAGTGAGGAATTTGCAAGGTATCTAAGAATCGTGGAAGAGCTGCAAAGAGTGGAAATAATGCATTTATCAAGAGAAGAAACGATTGCTTTCTTTATTAATCTATATAATATGATGACCATCCATGCAATTTTAGTATGGGGCCATCCAACTGGTGCACTAGAAAGAAGGAAAATGTTTGGAGACTTCAAATATATTATCGGCGGGTCTACCTACTCACTTTCAGCTATTCAAAACGGTGTTTTAAGAGGGAACCAACGACAACCATATACTCTTATGAGGCCATTTGGTGCAAAAGATAAACGTTTACATGTGGCCCTCTCTTTTCCAGAGCCTCTCATTCACTTTGCTTTAGTATGTGGTACTCGATCTGGGCCTGCACTTCGATGTTATTCTCCTCGAGACATTGACTCTGAATTAATGGATGCAACTCGCAGTTTCCTTAGAAATGGTGGCATTTCGATAGATTTTAATGCAAAGGTTGCACATACCAGTAAGATCCTGAAATGGTTCAGTGTAGATTTTGGCAAGAATGAGGTAGAAGTTATGAAGCATGTGTCAATCTACTTAGATTCATCTCAGTCAGAAATATTGTTTGACTTACTTGCCACTTCGGAGTTGAAGGTGATATATCAGCCTTATGATTGGGATTTGAATTGTTAG 2928 0.3689 MEDKELDESNEASVRAVSKLEGDGFASQDEDSDKQSEEEKMPNIGHDDAEFCNEQDDVSPKSLSSQDDEKVEGDAYVVQNKDHGELRQEKIQDNSHDGSNNENEHDRSSDMSSTQGVENMEGDTYVVQNEDHDGSKYENEHAEKLSGSSSSEDVENMERNVCVVQNEDHEESKQATSQNICHNGHEYENEQDDISSEKSSSSDVKNVKEDTYVVQNDDHIESKPDKSQNNSPDVHKHENEVDDDKSSKTSNSQDFENRGDTLDIDNEDHEESKQAKSHNISHDGLKYGNEQSDISSHSSPSQDVENLKVDTYVVQNEDQEESDKVRSENISHDGSKYDNEQDDLSSDTSSFETIEMQKSDACTIHNEDYNKDPNEEKFENLGYDGPGFEKRVDDILENIYGNIDEDKTSNESKTINPIVDVDPGTPHVVEKALALRNFVREKSLVAVSTLMRRLSRKVDEDNSDNKGNDVSDLSRDGESKEVGAENKTDKGEEPITESPLQPIVMKGRIILYTRLGCRETKEVRKFLYMKRLRYVEINIDVYPNRKIELEKVSGSTSVPIVFFNEVLIGDLSKLEALNESGKLDEKIEFIIAESPSFEAPVPPLSGEDDVSTSGPIDEMALIVRKMKESIVVKDRFSKLRRFTNCFLGCEAVDFLSENQYLERKEAVEFGRKLAIQLFFQHVLDENIFEDGNFLYRFLDDDPIVASQCQNIPKGITTVKPKPIKEIASRLRLLSYAMFEAYASEDGRHVDYRSMHGSEEFARYLRIVEELQRVEIMHLSREETIAFFINLYNMMTIHAILVWGHPTGALERRKMFGDFKYIIGGSTYSLSAIQNGVLRGNQRQPYTLMRPFGAKDKRLHVALSFPEPLIHFALVCGTRSGPALRCYSPRDIDSELMDATRSFLRNGGISIDFNAKVAHTSKILKWFSVDFGKNEVEVMKHVSIYLDSSQSEILFDLLATSELKVIYQPYDWDLNC* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2103 975 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 630 697 IPR000591 GO:0035556
Mtr5g2103 975 Gene3D Glutaredoxin 505 589 - -
Mtr5g2103 975 Gene3D - 616 745 IPR036388 -
Mtr5g2103 975 MobiDBLite consensus disorder prediction 314 343 - -
Mtr5g2103 975 SMART DEP_3 626 699 IPR000591 GO:0035556
Mtr5g2103 975 CDD DEP 622 696 - -
Mtr5g2103 975 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 974 - -
Mtr5g2103 975 SUPERFAMILY "Winged helix" DNA-binding domain 620 707 IPR036390 -
Mtr5g2103 975 Pfam Glutaredoxin 509 568 IPR002109 -
Mtr5g2103 975 Pfam Protein of unknown function, DUF547 777 903 IPR006869 -
Mtr5g2103 975 SUPERFAMILY Thioredoxin-like 500 588 IPR036249 -
Mtr5g2103 975 MobiDBLite consensus disorder prediction 457 498 - -
Mtr5g2103 975 MobiDBLite consensus disorder prediction 125 148 - -
Mtr5g2103 975 MobiDBLite consensus disorder prediction 284 313 - -
Mtr5g2103 975 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 974 - -
Mtr5g2103 975 MobiDBLite consensus disorder prediction 1 352 - -
Mtr5g2103 975 MobiDBLite consensus disorder prediction 185 251 - -
Mtr5g2103 975 MobiDBLite consensus disorder prediction 24 111 - -
Mtr5g2103 975 ProSiteProfiles Glutaredoxin domain profile. 497 594 - -
Mtr5g2103 975 ProSiteProfiles DEP domain profile. 626 699 IPR000591 GO:0035556
Mtr5g2103 975 MobiDBLite consensus disorder prediction 258 280 - -
Mtr5g2103 975 MobiDBLite consensus disorder prediction 457 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2103 Mtr-Chr5 27038340 27043852 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2103 - - mtr:MTR_5g061340 1925.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2103 5 27038340 27043852 Mtr5g2103 5 27038340 27043852 ECH
Mtr5g2103 5 27038340 27043852 Mtr3g2300 3 36674161 36678591 PCT