Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2300 ATGGAAGATCAGCATTTGTTGGAGACAAAGGAAGCAAGTTCCCAAGCGGTTGAGAAGCTGCAAGTAGATGCTTCTGCCATTCAGATTGAAGATCGGGATAAAGAGACAAAATCTCAGAATGTTGTTCATGATGGCCCTAAGTTTGACAGTAAACTGGATGATACATCGGACGTGATAACGGATGACAATGATGAAGAGAAAAAAATCAATGTCACTGGAGATTCTGGTTTAGCTCCGATCAATTCTGAAACTGAAATTGATAATGTTGGAAAAGAGTATTCTGGTGGAGATAAGGTGGAGGCCAACAGAAATTTTGAGGCTAAAAGTGAAGATACAAATCTAGATGAAATGCACAAATATGGACAGGATGATTTGGCTAAAGCAGAGAATGACGGTAGAGACATAGAATCCACAGATATGGATCAGAAGGCAGATGAAATTCCAAGTGAGGACAACAATTTGGACCCTGTATTTGATGGAACCGAGGTTCCGGGGATGGAAGTTAACCGGAGCACATCCACCCGTAAATTGGATGGAGATCAGGACAGTCCAGGTGTGGTTGAGAAGGCAGTCGCTCTTAAAAATCTTGTAAAGGAGAAAAGTGCAGTGGCAGTCTCCACTATGCTGCGCCGCCTTTCTGGAAAAAGTGATGAAGCTGATGTGGGTGATTTTGATGATGAAGGCAAGAATGTTTCAGATGTCTCAGAAGTTAATGAAGCCAAATTGGTTTCTGAGAAGCCAGTGGAGAAATCTGCTTGGAATCCCTTAAATTATATTAAGAAGTCATTTGATGTTGATGTGGAAAACAAAACTGATCAGAGGGATTCAGTAACAAATGGTCCATCATCACCAATAGCCATGAAAGGAAGGATTATATTGTACACCAAACTAGGGTGTCAAGAATCTAGAATATTTAGGCTATTTTTACGTACAAAAAGACTTAGGTTTGTGGAAATCAACATAGATGTATACCCTAGTAGAAAGATGGAGTTGGATAAGATATCTGGATCTACTTCTGTTCCCAAGTTGTTTTTCAATGAAATATGTATTGGAGGCTTGAGTGAGCTTAAAAACTTGGATGAATCTGGAAAGCTTGATGAGAAGATTGACTTTCTTATTACCGAAGCACCGTTATTTGAGACCCCATCACCGCCTTTTTCTGGAGAGGATGATATTTCCGTTAGTGGGGCAGTTGATGAATTGGCTCTTGTTGTACACAAAATGAAAGAATCTATTACTGTGAAAGACAGATTGTACAAAATGCGCAGGTTTACCAACTGTTTTTTGGGATCTGATGCTTTAGACTTCTTATCAGAAGATCAATATTTGGAAAGGCAAGAGGCTGTTGAATTTGCTCGAAAGCTTGCTGACAAATTTTTCTTTCGACATGTTCTTGATGAAAATTTATTTGAAGATGGCAATCATGTATATCGCTTTTTGGATGATGATCCAATTGTGATGTCACAATGTTACAATATTCCAAAGGGTATTATTACCATTAATCCAAAGCCTATCGCAGAAATTGCATCAAGGCTGAGATTTCTGGCCTCTGCAATGTTCGAAGCCTATGCTATTGAAGATGGATGTCGCGTTGACTATACAAGTTTGCATGGAAGTGAGGAGTTCGCCAGGTATCTGAGAATAGTTGAAGAGCTCCAAAGAGTTGAAATATTGGATTTGTCTAGAGAAGAAAAGCTTGCTTTCTTTATTAATCTTTATAACATGATGACCATCCATGCAATCTTAATATTGGGTCATCCAGATGGAGCATTGGAAAGAAGGAAATTATTTGGAGAGTTCAAATATGTTATAGGTGGTTCCACCTACTCCCTTTCAGCTATTCAAAATGGAATATTGAGGGGAAACCTACGACCTCCATATAACCTTAAGAAGCCATTTGGTGCAAAAGATAAACGCTTAAAGGTTGCACTCCCTTACCCCGAGCCTATGATTCATTTTGCTTTGGTATGTGGCACCCGATCTGGGCCTGCCCTTCGATGCTATTCTCCTGGAAAAATTGACGAAGAATTATTGGATGCAACTCGTAATTTCCTAAGAAGTGGAGGTCTTGTGATTGATTTGACGGCAAAGACTGCATATGTCAGCAAGATTCTTAAATGGTATAGTATAGATTTTGGCAAGAGCGAGGTTGAGGTGATCAAGCATGTGTCAAACTATTTAGATCCAACTGACTCAGCAATATTATTGGACCTGCTTGCCTCTTCTGAATTGAAGGTTACATATCAGCCTTATGACTGGGGTTTGAACTACTAG 2274 0.3953 MEDQHLLETKEASSQAVEKLQVDASAIQIEDRDKETKSQNVVHDGPKFDSKLDDTSDVITDDNDEEKKINVTGDSGLAPINSETEIDNVGKEYSGGDKVEANRNFEAKSEDTNLDEMHKYGQDDLAKAENDGRDIESTDMDQKADEIPSEDNNLDPVFDGTEVPGMEVNRSTSTRKLDGDQDSPGVVEKAVALKNLVKEKSAVAVSTMLRRLSGKSDEADVGDFDDEGKNVSDVSEVNEAKLVSEKPVEKSAWNPLNYIKKSFDVDVENKTDQRDSVTNGPSSPIAMKGRIILYTKLGCQESRIFRLFLRTKRLRFVEINIDVYPSRKMELDKISGSTSVPKLFFNEICIGGLSELKNLDESGKLDEKIDFLITEAPLFETPSPPFSGEDDISVSGAVDELALVVHKMKESITVKDRLYKMRRFTNCFLGSDALDFLSEDQYLERQEAVEFARKLADKFFFRHVLDENLFEDGNHVYRFLDDDPIVMSQCYNIPKGIITINPKPIAEIASRLRFLASAMFEAYAIEDGCRVDYTSLHGSEEFARYLRIVEELQRVEILDLSREEKLAFFINLYNMMTIHAILILGHPDGALERRKLFGEFKYVIGGSTYSLSAIQNGILRGNLRPPYNLKKPFGAKDKRLKVALPYPEPMIHFALVCGTRSGPALRCYSPGKIDEELLDATRNFLRSGGLVIDLTAKTAYVSKILKWYSIDFGKSEVEVIKHVSNYLDPTDSAILLDLLASSELKVTYQPYDWGLNY* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2300 757 SMART DEP_3 408 481 IPR000591 GO:0035556
Mtr3g2300 757 MobiDBLite consensus disorder prediction 88 183 - -
Mtr3g2300 757 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 756 - -
Mtr3g2300 757 SUPERFAMILY "Winged helix" DNA-binding domain 402 486 IPR036390 -
Mtr3g2300 757 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 412 479 IPR000591 GO:0035556
Mtr3g2300 757 ProSiteProfiles Glutaredoxin domain profile. 279 376 - -
Mtr3g2300 757 SUPERFAMILY Thioredoxin-like 288 370 IPR036249 -
Mtr3g2300 757 Pfam Protein of unknown function, DUF547 559 685 IPR006869 -
Mtr3g2300 757 Gene3D - 394 485 IPR036388 -
Mtr3g2300 757 MobiDBLite consensus disorder prediction 90 150 - -
Mtr3g2300 757 Pfam Glutaredoxin 291 347 IPR002109 -
Mtr3g2300 757 ProSiteProfiles DEP domain profile. 408 481 IPR000591 GO:0035556
Mtr3g2300 757 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 756 - -
Mtr3g2300 757 MobiDBLite consensus disorder prediction 28 63 - -
Mtr3g2300 757 CDD DEP 400 478 - -
Mtr3g2300 757 Gene3D Glutaredoxin 286 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2300 Mtr-Chr3 36674161 36678591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2300 - - ccaj:109797380 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2300 3 36674161 36678591 Mtr3g2300 3 36674161 36678591 ECH
Mtr5g2103 5 27038340 27043852 Mtr3g2300 3 36674161 36678591 PCT