Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1646 ATGAAGAAATTGTACGGAGGAGTTCTGATTGCCTCATCTTTTACACTGTTTATGCTCATGATCCTGCGATATGGGGTCATGAAAAATCCTATTGGTGAAGGTTATTTGACTATACCTGTCTTAATTAATGGTACTAATCCTCTTGAATGGATTAATCCGGTGATTCCGCCTGCTATTCATAATCCAGTTGCTACTTCTCAAGTTATTTCTGCGGACATTTTAGTATCTAGCCTCTTTGCCAGGAACAACTTTTCCAAACAAGAGCAGCAAACTCTGCAGACATGGAACCATTTGAAACACTTAATTGATCATGTTCAGGGTTTACCTAGTGCAACAGAAGCTATCAAGGAAGCTGCCAGTGCTTGGAATAGTCTTGTTTCCTCAGTTGAAGAGCAAAAGCAAGGTCATGGAAATGATAGTTCAAAAGCAAAAGAGAAACAGTGTCCCCATTTTCTTAATAAGATGAATTCTACTGAACTTGGTAATAGTAGTTACAGACTGCAAGTACCTTGTGGTCTGACACAGGGTTCTTCGATTACTGTAATTGGCATTCCAAATGGTATTCTAGGTAATTTTCGGATAGATTTGACTGGTGAACCAATCCCTGGGGAGCCTGATCCCCCAGTTATCTTGCACTACAATGTTAGGCTTCATGGTGATAAAATCACCGAAGATCCAGTAATTGTCCAAAACACCTGGACAGTAGCTCATGATTGGGGTGAAGAGGAACGATGTCCATCCCCTGAATCTGCACAGGTTAAGAAAGTTGATGAGTTAGAGCAGTGCAATAAGATTGTTGGGAACAACATTAGCCATCTTTACACGGGTGGCATGCATTCCCACACTTCAAGACAAATTTCAGCAACTGAAGAGCAATCAATTAAGAGAAAATACTTCCCTTTTAAGCAAGGATACCCTTTTGTCGCAACCATTAGAGTGGGATCAGAGGGAATCCAGATGACAGTTGATGGAAAACACATAACTTCATTTGCTTTTCGTGAAACTTTGGAGCCATGGCTTGTCAGTGAGATCAAAATTTCTGGGGACCTAAAACTAGAATCTATTCTTGCAAGTGGTCTGCCTACATCAGAGGATTCAGAGCATGTTGTTGATCTGGAATTATTGAAAGCAAGTCCTCTATCTGCACAGACCCCATTGGATCTTGTCATTGGTGTTTTCTCTACTGCTAACAATTTTAAGCGACGGATGGCTGTTAGAAGAACCTGGATGCAGTACAATGCAGTTAGATCAAGTACAACGGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGTCAAATAGTTAATGAAGAACTGTGGAAAGAAGCACAAACGTATGGAGACATACAGTTGATGCCGTTTGTTGACTACTACAGCCTCATCACCTGGAAATCTTTAGCAATATGTATTTTCGGGACACAGGTTGTTTCAGCAAAGTTTGTCATGAAGACAGATGATGATGCATTTGTTCGTGTAGATATAGTGCTAGCCTCTTTGAAGAGGATCAATGTGTCTCATGGGTTACTATATGGACTCATCAATTCAGATTCCCAGCCTCATCGAAATCCTGATAGCAAATGGTACATCAGCCAAGAGGAATGGAGCGAAGGAACTTATCCTCCATGGGCACATGGTCCCGGTTATGTGGTTTCACATGACATAGCAAGGACAGTTTACAAGAAATACAAAGAGAATCATTTGAAGATGTTTAAGTTAGAAGACGTTGCGATGGGAATCTGGATCGCAGACATGAAGAAGGAAGGTCTAGAAGTTCGATACGAGAATGAGGGCAGAGTTTATAATGAAGGTTGCAAGGATGGTTATGTGGTTGCCCATTATCAAGGTCCTAGGGAGATGCTATGTTTGTGGCACAAACTTCAGGAGTTAAAACGCGCAACATGCTGTGGTGATAGGAGGAGGTGA 1920 0.4135 MKKLYGGVLIASSFTLFMLMILRYGVMKNPIGEGYLTIPVLINGTNPLEWINPVIPPAIHNPVATSQVISADILVSSLFARNNFSKQEQQTLQTWNHLKHLIDHVQGLPSATEAIKEAASAWNSLVSSVEEQKQGHGNDSSKAKEKQCPHFLNKMNSTELGNSSYRLQVPCGLTQGSSITVIGIPNGILGNFRIDLTGEPIPGEPDPPVILHYNVRLHGDKITEDPVIVQNTWTVAHDWGEEERCPSPESAQVKKVDELEQCNKIVGNNISHLYTGGMHSHTSRQISATEEQSIKRKYFPFKQGYPFVATIRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDLKLESILASGLPTSEDSEHVVDLELLKASPLSAQTPLDLVIGVFSTANNFKRRMAVRRTWMQYNAVRSSTTAVRFFVGLHKSQIVNEELWKEAQTYGDIQLMPFVDYYSLITWKSLAICIFGTQVVSAKFVMKTDDDAFVRVDIVLASLKRINVSHGLLYGLINSDSQPHRNPDSKWYISQEEWSEGTYPPWAHGPGYVVSHDIARTVYKKYKENHLKMFKLEDVAMGIWIADMKKEGLEVRYENEGRVYNEGCKDGYVVAHYQGPREMLCLWHKLQELKRATCCGDRRR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1646 639 Gene3D - 156 357 - -
Mtr5g1646 639 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 358 IPR001079 GO:0030246
Mtr5g1646 639 PANTHER - 65 627 - -
Mtr5g1646 639 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 65 627 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr5g1646 639 SMART Gal_bind_lectin_2 169 357 IPR001079 GO:0030246
Mtr5g1646 639 Pfam Galactoside-binding lectin 165 356 IPR001079 GO:0030246
Mtr5g1646 639 Gene3D - 379 604 - -
Mtr5g1646 639 CDD GLECT 165 355 IPR001079 GO:0030246
Mtr5g1646 639 Pfam Galactosyltransferase 400 584 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr5g1646 639 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 358 IPR013320 -
Mtr5g1646 639 SMART galectin_3 165 358 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1646 Mtr-Chr5 18020081 18026452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1646 1 634 Glycosyltransferase AT1G26810 63.863 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1646 K14413 - gmx:100782548 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1646 5 18020081 18026452 Mtr5g1646 5 18020081 18026452 ECH
Mtr4g4498 4 58935757 58940334 Mtr5g1646 5 18020081 18026452 PCT