Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4498 ATGAAGAAGTTGTATGGAGGCCTTTTTATCATGGCTTTAGGTATGACGTTGTTTCTACTGTACAGTCTTAAAGGAATTCAGCCACAAAAGCAGTCAACAAAACAGTCAGCATACAGTTTTTTCAATAACCATTCACCACCAAATGATTCTATTAAAGAAAACAACCATGTTGCAGTAGTAACCTCTTTCGATGCAGATCAGAAAATGGCACCGAAACCAACAAAACGGCCACATTTGATACATGTCACAGGGCTAGATGATCTTTATGGCGCAAAATTTTTATCTGAACAAGAGATGAATGTTGTACTTGTTTGGACACATTTACGTTTGTTGCTGTCGAGGTCAGATGCTTTGCCCGAAATAGCTCAAGGAGTTAAAGAGGCTTCTGTAGCTTGGAAAGAGTTGCTGTCAACTGTTGAAAATGACAAAGCCTCGAAGATTAGTAAGATAGATGGCCCAGAAAATCAAAACTGTCCATTCTCTGTGACCAAACTTGGCAAGACAATGACAGATAGTGAAATCACACTGGATCTCCCTTGTGGTTTGGTCGTAGATTCTTCTATTACACTGATTGGCATCCCTAATGGACAAAACAGTAGCTTTCAGATTGAGCTAGCTGGACAAGAGCTAGAAGAGGAGCCAAATCCCCCAATTATCTTGCATTATAATGTGAGTCTTCCTGGAGAAAACATGACAGAGATGCCGTATATTGTTCAAAATACATGGACTAGTGATTTTGGGTGGGGGAAAGAGGAAAGATGCCCTGCTCATGGTTCTGCTAACATCCGCAAAGTTGATGAGCTTGTTCTCTGCAATGTACAAGCTGTCAGAAGTAACAACGAAGAGAATGTAAATGCTGGTCAACCTACTAGCGATATACCTTCTAATATTTCCTCAGAAAGTGCACATAGAACTGCTAATTTCCCTTTTTCTGAGGCTAATCCTTTCACTGCCACATTGTGGGTTGGGTCAGAAGGATTTCATATGACTGTAAATGGAAGGCATGAAACATCTTTTGCATATAGGGAGAAACTTGAACCATGGTTAGTCAACACGATTAAAGTAGCAGGCAGTTTAAGTCTGTTATCAGTTCTGGCTAAAGGTTTACCTGTTACAGAAGATAATGATATAGTTGTTGATGTTGAGAACCTGAAGGCTCCAGCTATCCCTAGAAAAAGGCTTGTTTTATTGATCGGGGTATTCTCTACCGGAAATAACTTTGAGCGTCGAATGGCTCTGAGGAGGTCTTGGATGCAATTTGAGGCTGTACGTTCTGGTGACGTTGCTGTCAGATTTTTCATTGGACTTCATAAGAATAATAGAGTTAATCTTGAATTATGGAGGGAAGCTCAAGCATATGGAGATATCCAGTTAATGCCTTTTGTTGATTATTATAGTTTGATTTCTTTGAAGACAATTGCAATTTGTATTCTGGGGACAAAAATCATTCCGTCTAAATACATCATGAAAACAGATGATGATGCTTTCATAAGGGTTGATGAAGTGCTTTCCAGCCTCAAAGGGAAGCCATCTGAAGGCCTCTTGTACGGTCTAATATCTTCTAAATCATCTCCTGATAGGGATAAGGACAGCAAATGGTACATCAGTGACGAGGAATGGCCACATGATACATACCCACCATGGGCACATGGTCCTGGATATGTCATATCTCGCGACATAGCAAAATTCGTTGTCTTTGGCCACCAGGAAAGAAAACTCAAGTTCTTCAAATTAGAAGATGTTGCCATGGGCATATGGATTGAACAATTTAGGAATGGTGGAAAAGAAGTTCACTATGAGAATGACGAGAGGTTTTACAATGCTGGATGTGACTCAAATTATGTACTTGCTCATTATCAAAATCCAAGGATGGTGTTATGCCTTTGGGAGAAACTGCAGAAAGAACACAAACCAGAATGTTGTGAGTAG 1929 0.4002 MKKLYGGLFIMALGMTLFLLYSLKGIQPQKQSTKQSAYSFFNNHSPPNDSIKENNHVAVVTSFDADQKMAPKPTKRPHLIHVTGLDDLYGAKFLSEQEMNVVLVWTHLRLLLSRSDALPEIAQGVKEASVAWKELLSTVENDKASKISKIDGPENQNCPFSVTKLGKTMTDSEITLDLPCGLVVDSSITLIGIPNGQNSSFQIELAGQELEEEPNPPIILHYNVSLPGENMTEMPYIVQNTWTSDFGWGKEERCPAHGSANIRKVDELVLCNVQAVRSNNEENVNAGQPTSDIPSNISSESAHRTANFPFSEANPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWLVNTIKVAGSLSLLSVLAKGLPVTEDNDIVVDVENLKAPAIPRKRLVLLIGVFSTGNNFERRMALRRSWMQFEAVRSGDVAVRFFIGLHKNNRVNLELWREAQAYGDIQLMPFVDYYSLISLKTIAICILGTKIIPSKYIMKTDDDAFIRVDEVLSSLKGKPSEGLLYGLISSKSSPDRDKDSKWYISDEEWPHDTYPPWAHGPGYVISRDIAKFVVFGHQERKLKFFKLEDVAMGIWIEQFRNGGKEVHYENDERFYNAGCDSNYVLAHYQNPRMVLCLWEKLQKEHKPECCE* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4498 642 CDD GLECT 175 364 IPR001079 GO:0030246
Mtr4g4498 642 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 174 367 IPR001079 GO:0030246
Mtr4g4498 642 SMART Gal_bind_lectin_2 178 366 IPR001079 GO:0030246
Mtr4g4498 642 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 90 634 - -
Mtr4g4498 642 Gene3D - 391 627 - -
Mtr4g4498 642 Gene3D - 169 366 - -
Mtr4g4498 642 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 90 634 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr4g4498 642 Pfam Galactoside-binding lectin 175 365 IPR001079 GO:0030246
Mtr4g4498 642 SUPERFAMILY Concanavalin A-like lectins/glucanases 175 368 IPR013320 -
Mtr4g4498 642 Pfam Galactosyltransferase 408 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr4g4498 642 SMART galectin_3 170 367 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4498 Mtr-Chr4 58935757 58940334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4498 52 642 Glycosyltransferase AT3G06440 54.040 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4498 K20843 - gmx:100816729 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4498 4 58935757 58940334 Mtr4g4498 4 58935757 58940334 ECH
Mtr4g4498 4 58935757 58940334 Mtr5g1646 5 18020081 18026452 PCT