Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1589 ATGTTGGAGGGTCGTTGCTGTGTTGTTTCGAGGTTGTTTTGTAGCACTTGTGAAACAGAGAACGATTGGTCTTACATGAAGTACATGCTGGATTTGGACATCAAAAATGGCAAAAGACCAATGAAAATTGATTCTGCTGAGGATGAACATCATCCTAGGAAGTGTACTAAGATGTTGGAATCTTGTCACATAGTTGAAACGGTTTGTATTTCGTTGCAACATCCTAAGGATGCTGTTCTTCCTGAAACGGATCAGAAAATCAATGAACCCTTGAATGTTTGTCAAGGAGTTCATGATGGTGGTGATTCAATAGATTCATCAGATTCTGGTATTCAGCAATCTGATGAGGAGCAGCATGCTGGAGATTCGTCGGATTCTGGTTCTCTTTTACCAAGGATGAACAGAGACAGCTCAATCGTGTGTCTCAGTCGCTGTTCAAGGTCTGATTATGGTTCGCTTGCTTCGCTGAATAGAAGCTTCCGTGAAATAATCCGAAACGGCGAGGTTTATAGGTGGAGGAGACTAAATGGTATCATGGAACATTGGGTTTATTTCTCGTGTGCTCTCCTTGAATGGGAAGCGTACGACCCAATTCGCCAAAGGTGGATGCATTTGCCGAGGATGGCTTCAAATGATTGCTTCATGTGTTCTGATAAAGAATCTTTAGCTGTAGGAACCGAACTTCTTGTGTTTGGGAGGGAGCTTAGATCTCATGTGATATATAGATACAGTCTTTTGACAAATTCATGGTCCTCTGGAATGAGAATGAATGCTCCAAGATGTTTGTTCGGCTCTGCAAGCCTTGGTGAGATTGCGATATTAGCAGGTGGTTGTGATTCGGAGGGACGCATACTTGACTCCGCCGAACTATACAATTCTGAGACGCAAACGTTTGAACTACTCCCGAGCATGAATAAACCGAGGAAGATGTGTTCTGGTGTATTCATGGATGGAAAATTTTATGTTGTAGGTGGAATCGGCGGACGCGATTCAAAGCTTCTTACATGCGGTGAAGAGTATAATTTACAAACCAGAACATGGACAGATATTCCTGACATGTCCCCCGGACGAAGTAGTAGAGGTTCTGAGATGCCTGCTGCAACCGAGGCACCGCCTCTCATTGCCGTTGTAGATAATGAATTGTATGCTGCTGATTATGCTGACATGGAAGTTAAAAGGTATGACAAGGAAAGAAAACTGTGGATTACTGTTGGTAGACTTCCAGAACGAGCGATGTCGATGAATGGTTGGGGTCTTGCATTTAGGGCATGTGGAAATATGCTCATTGTTATTGGCGGACCTAGGACTCATGGTGAAGGTTTCATTGAACTCAATTCTTGGGTACCTAGTGAAGGACCTCCACAATGGCGTCTACTAGCTCGAAAACGATCTGGTAACTTCGTTTATAATTGTGCGGTGATGGGTTGCTGA 1431 0.4354 MLEGRCCVVSRLFCSTCETENDWSYMKYMLDLDIKNGKRPMKIDSAEDEHHPRKCTKMLESCHIVETVCISLQHPKDAVLPETDQKINEPLNVCQGVHDGGDSIDSSDSGIQQSDEEQHAGDSSDSGSLLPRMNRDSSIVCLSRCSRSDYGSLASLNRSFREIIRNGEVYRWRRLNGIMEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNDCFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSETQTFELLPSMNKPRKMCSGVFMDGKFYVVGGIGGRDSKLLTCGEEYNLQTRTWTDIPDMSPGRSSRGSEMPAATEAPPLIAVVDNELYAADYADMEVKRYDKERKLWITVGRLPERAMSMNGWGLAFRACGNMLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLARKRSGNFVYNCAVMGC* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1589 476 Pfam Kelch motif 307 354 IPR006652 GO:0005515
Mtr5g1589 476 Pfam Kelch motif 259 305 IPR006652 GO:0005515
Mtr5g1589 476 Gene3D - 183 462 IPR015915 GO:0005515
Mtr5g1589 476 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 476 - -
Mtr5g1589 476 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 476 - -
Mtr5g1589 476 MobiDBLite consensus disorder prediction 103 132 - -
Mtr5g1589 476 MobiDBLite consensus disorder prediction 105 132 - -
Mtr5g1589 476 SMART kelc_smart 319 367 IPR006652 GO:0005515
Mtr5g1589 476 SMART kelc_smart 227 270 IPR006652 GO:0005515
Mtr5g1589 476 SMART kelc_smart 271 318 IPR006652 GO:0005515
Mtr5g1589 476 SUPERFAMILY Kelch motif 189 473 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1589 Mtr-Chr5 17266626 17269487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1589 - - gmx:100818865 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1589 5 17266626 17269487 Mtr5g1589 5 17266626 17269487 ECH
Mtr5g1589 5 17266626 17269487 Mtr4g3916 4 52906801 52908952 PCT