Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1517 ATGAAGAAAGTGAAGCTTGAAGTGTTGACACTCCCAAACAGACTCACACTGATTCAAATTTTCATGATGATGATGCTTCTCTACATGCTTTTCATGAGCTTTGAAATTCCCTTAGCTTTCAAAGCAGGATTAGGTTCAGAAACTGTAGCTAATATTGGGGTTTTCACCACCGACGCAATGCCACTTTTGGAAGAACAAAATCACAAACAAAAACGACCCTTTGGGTTATTATTACGGAAAGTTTCAACCTTGAGCTTTAACAATAGCTTTGAAGGTGTATCAGAGCTTGACAAGGTAGCAAAACATGCTTACAGTTCTGGTAAAAAGTTATGGGAAGAAGTTGAAAGTGGTAAAGTTAAGAGTTTTTCGGGTTTTAAAAAAGCCAAAAATGGTTCGGATTCTGATACTTGTTTGAGTTCAGTTTCAGCTTCTGGGTTTGAGTTTAGGGAGAAGTTGAAAGGGGTTATGGTTTTGAATTGTGGGTTGACACTTTGGTCTCATGTGACTGTTGTGGGGACACCACGTTTTGCACATGGTGAGAGTGATCCAAAGATTGGTGGTGTGAGAAATGGTGATGAAAAGGTTATGGTTTCACAGTTTATGTTGGAGTTGCAGGGTTTGAAAGCTGTTGATAATGAAGAGCCACCAAAGATATTGCATTTTAATCCTAGGCTTAAAGGGGATTGGAGTGGGAAGCCTGTTATTGAACAGAATACTTGTTATAGGATGCAATGGGGGACTGGTCTTAGGTGTGAGGGATGGAAGTCTCGCGCGGACGAGGAAACTGTTGATGGACAGGTGAAATGTGAGAAATGGATTCATGATGATGATAATCGATCGGAAGAGTGGAAGGCGACGTGGTGGTTGAACAGACTGATGGGGCGAAAAAAGGTCGTGCCTGTTGAATGGCCATATCCTTTTGCCGAGGGGAAATTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATATTACTGTAGATGGGAGGCATGTGACTTCCTTTCCGTATCGCACAGGCTTTGCTCTTGAGGATGCTACTGGACTATCCATAAATGGAGACGTCGATGTGCACTCTATATATGCTGCTTCCTTACCTACATCACATCCTAGCTTTGCTCCTCAGATGCATCTTGAATTGCTTCCTCGGTGGAAGGCACCACCTATTCTCGACGTGAACGTCGAGCTTTTCATCGGTATCCTTTCCGCTGGCAACCATTTTGCTGAACGGATGGCAGTGAGGAAGTCATGGATGCAACATAAGCTAATCAAATCCTCTCATGTTGTGGCTCGGTTTTTCGTGGCCTTGCATGGAAGGAAGGATATAAATGTGGAGATAAAGAAAGAAGCTGAGTATTTCGGCGATATTATTATAGTACCATACATGGATCATTATGACCTTGTTGTTTTGAAGACCGTAGCCATATGTGAATACGGGATACGCTCGGTGGCTGCTAAGTATATCATGAAGTGTGATGATGACACGTTTGTTAGAGTGGACTCTGTCATAAGCGAAGCGAGAGAAGTTCAAACTGGTAAAAGCCTTTATATGGGAAATATGAATTACCACCACAAGCCTCTTCGTGATGGGAAATGGGCTGTAACTTACGAGGAATGGGTAGAGGAAGAGTATCCTCCCTATGCTAATGGTCCGGGTTACATCGTCTCATCTGACATTGCTCGGTTCATTGTATCCGAATTTGAAGAGCAAAGACTGAAATTATTTAAAATGGAAGACGTGAGCATGGGAATGTGGGTAGAACAATTCAACAGCTCAAGAGAAGTAGAATATGTGCACAGCTTTAAGTTCTGCCAATTCGGGTGCATCGAAGATTACTACACAGCACATTACCAATCGCCAAGACAAATGACTTGCATGTGGGATAAATTGCAACATCAAGGTAAACCACTTTGTTGCAACATGAGATGA 1932 0.4244 MKKVKLEVLTLPNRLTLIQIFMMMMLLYMLFMSFEIPLAFKAGLGSETVANIGVFTTDAMPLLEEQNHKQKRPFGLLLRKVSTLSFNNSFEGVSELDKVAKHAYSSGKKLWEEVESGKVKSFSGFKKAKNGSDSDTCLSSVSASGFEFREKLKGVMVLNCGLTLWSHVTVVGTPRFAHGESDPKIGGVRNGDEKVMVSQFMLELQGLKAVDNEEPPKILHFNPRLKGDWSGKPVIEQNTCYRMQWGTGLRCEGWKSRADEETVDGQVKCEKWIHDDDNRSEEWKATWWLNRLMGRKKVVPVEWPYPFAEGKLFVLTISAGLEGYHITVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIYAASLPTSHPSFAPQMHLELLPRWKAPPILDVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHGRKDINVEIKKEAEYFGDIIIVPYMDHYDLVVLKTVAICEYGIRSVAAKYIMKCDDDTFVRVDSVISEAREVQTGKSLYMGNMNYHHKPLRDGKWAVTYEEWVEEEYPPYANGPGYIVSSDIARFIVSEFEEQRLKLFKMEDVSMGMWVEQFNSSREVEYVHSFKFCQFGCIEDYYTAHYQSPRQMTCMWDKLQHQGKPLCCNMR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1517 643 CDD GLECT 158 361 IPR001079 GO:0030246
Mtr5g1517 643 Gene3D - 393 628 - -
Mtr5g1517 643 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 643 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr5g1517 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 156 362 IPR013320 -
Mtr5g1517 643 Pfam Galactosyltransferase 410 591 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr5g1517 643 Gene3D - 147 362 - -
Mtr5g1517 643 SMART Gal_bind_lectin_2 158 363 IPR001079 GO:0030246
Mtr5g1517 643 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 7 643 - -
Mtr5g1517 643 Pfam Galactoside-binding lectin 155 362 IPR001079 GO:0030246
Mtr5g1517 643 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 154 364 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1517 Mtr-Chr5 16225809 16231399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1517 1 643 Glycosyltransferase AT1G74800 60.492 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1517 K20843 - gmx:100803219 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1517 5 16225809 16231399 Mtr5g1517 5 16225809 16231399 ECH
Mtr5g1517 5 16225809 16231399 Mtr8g1870 8 28370239 28375303 PCT