Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0854 ATGGGTTCTGTTGGAGGTGAAGAGGCAATGGAAGAGGCTACAAAAAATCATGAAGAAAGAATTCAAGTTTCGGTTCGAATTCGTCCTTTAAATGATAAGGAAATTGCAAGAAATGATGTATCTGATTGGGAATGTATCAATGATACTACCATTATATACAGGAATAACATTTCAGCTTCTGAAAGATCTCTCTATCCAACAGCATATTCATTTGACAGAGTATTTAGATCAGATTGCTCCACAAGGCAGGTGTACCAAGAAGCAGCTAAGGAAGTTGCTCTTTCTGTTGTTAGTGGAATCAATTCAAGCATTTTTGCATATGGACAAACAAGCAGCGGAAAAACTTACACCATGAGCGGTATAACTGATTGTACTGTAGCAGACATTTTTAACTACATGGGAAAGCACATGGAGAGAGAATTCATTTTGAAGTTTTCGGCAATTGAGATTTACAACGAATCTGTTAGGGATCTGCTTAGTGCAGATTATACTCCTCTTAGACTTCTTGATGATCCTGAGAGAGGGACAGTTGTTGAGAAGCTTACTGAGGAAACTATTAGAGATTGGAACCATTTTACAGAACTCATTTCTTTCTGTGAAACTCAAAGGCAGATAGGAGAGACATCACTGAATGAAGCAAGCTCTAGATCTCATCAGATTCTTAGACTGACAGTTGAAAGTTCAGCGCGCGAATTTCTTGGAAATGACAAGTGCAGCTCTCTTTCTGCTTCAGTGAATTTTGTTGATCTAGCTGGAAGTGAAAGGGCATCCCAAACCAATTCAGCCGGGGTAAGGTTGAAAGAAGGTTGCCATATAAATCGTAGTTTATTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGAAGAAATGGACATATTCCTTTCAGAGATTCAAAGCTAACGCGCATATTGCAATCATCATTAGGAGGCAATGCTAGAACTGCAATCATCTGCACCATGAGCCCTGCGCGGAGCCATGTTGAACAAACCCGAAACACTCTCTTCTTTGCAAGTTGTGCTAAAGAAGTTGAAACTAATGCACAAGTCAATGTAGTGGTATCTGATAAAGCACTAGTCAAGCAATTACAAAAGGAGGTGGCTAAACTCGAAAGTGAATTGAGAAATTCAGGACCAGCACGCCCTAATAGTTCTGATTCTACAGCATTATTGAGAGAGAAAGACCAAGAAATTGAGATGTTAAAGAAAGAGGTGAAGGAGCTAACCTTGCAGCGCGACCTTGCACAAGTTCAAATCAAGGACATGCTCCAAGAGGCTGGAAATAACATGTCTAGTTTAATAGGAGTGGAGAGTTTAGGTCCTCGGTATCCCAAATTACGCGTGACAAATAATTGGAACTTCGAAACTCGAAGAGAGGAACCAAATGTATTAAGTATTGACTGTGAAGAAAGTGTTAGGTCCTTTGATGCATCTCAATATTCAGATGGACATAGTATTAGTTCTGATGATAATTTGTTCCAACTCCCTGACCTTGAAAAGGATCTCATGGTTAGAAATTCTTCACCAAGGCTTACAATTACAAGCATTGATGCTGCACAGAATGATTTGGATCAGCAGAACATTGAAGATCAAGATGAACAGGATTATTGTAAAGAAGTTAGGTGCATTGAGTTAGAAGAGCCTATCACAAATCAACATACACACACAAACTCAAAATATTTAAGATCAAATACATATAGTGATTCTAGTGCATCATCTCCTCGCGCAAAGACAGATTTGCCAGGACTGATTGTAGTTGATGATGTGAACAAAAACGATACGGATTTTTGTTCATCTGGTTTAAAGGAAGACAAAAGAGTGAACCATTTGCGTGAATATTTTGCTCTTCCGACTCCCGAAAGTAGTACTCCTTGGCTGACAGAAAATAATAGAATTAGTTCTAGTTCTAGTTCTAGACCATCGAGGTTGAGCTTGAGCCGAAGTAGAAGTTGTAAAGCTAGTCTCATGAAGAATTTACCTTCTGATTGGTTTGAAGATGATGAGGAAATTCAGAATACACCTCCAGTAGGGAATGAAAAAGACTTTGCTGGAAGACCTGAGGGATTTCTGAAGAAGGTTCATACACTAAATTATAATGCAAATGCTGAGAGGAATTCTATGGAAAGTTCTGCTGCTGATGAAAGTGGGACCAATGGTCTTTTAACTCCAAAAAGAAAGGAAACAGAAAATCTTAAGAGATTGAATTTACTGGCTGACCATGAGGTTCCTGGGATAGAATTGGATGCCATTATGTCTGCAAAGAATGTAAAAGATATTGGTTTGGACCCAATGCAAGCTGATGGAGAAAATCATTCAGAGTGGCCATTGAAATTTAAGAGGCTTCAAAAGGAGATTATTGAACTATGGGATGCTTGTAATGTTTCATTGGTTCATAGGACTTACTTTTTCCTTCTCTTCAAAGGAGATCCATTAGATTCTATTTATTTGGAGGTAGAGCACAGAAGGCTATTATATCTTAAGCAAACTTTTTCACAAGGCAATAAAACTCTACAAGATGGAAGAACCCTTACCCCTGAAACAAGCATGAGATATCTAAGAAGAGAGAGGCAGATGTTGTGCAAGCAAATGCAGAAAAAGCTATCAAAATATGATAGAGAGGACTTATACATGAAATGGAGCATTCACTTGAGTTCAAAACATAGGAGGTTACAGTTAGCACATCATCTATGGACTGACACAAACAACATTGATCACATTAGAGAGAGTGCAGCAGTTGTTGCCAAACTGGTTGGTCCAGTAGAGCCAGAACAAGCTCTTAAGGAAATGTTTGGGCTCAATTTTGCTCCAAGGTCCACAAGTAGGAAATCTTTTAGTTGGTCTTTCACAAACAGTATGAGGCAGATTTTGTGA 2871 0.3884 MGSVGGEEAMEEATKNHEERIQVSVRIRPLNDKEIARNDVSDWECINDTTIIYRNNISASERSLYPTAYSFDRVFRSDCSTRQVYQEAAKEVALSVVSGINSSIFAYGQTSSGKTYTMSGITDCTVADIFNYMGKHMEREFILKFSAIEIYNESVRDLLSADYTPLRLLDDPERGTVVEKLTEETIRDWNHFTELISFCETQRQIGETSLNEASSRSHQILRLTVESSAREFLGNDKCSSLSASVNFVDLAGSERASQTNSAGVRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLFFASCAKEVETNAQVNVVVSDKALVKQLQKEVAKLESELRNSGPARPNSSDSTALLREKDQEIEMLKKEVKELTLQRDLAQVQIKDMLQEAGNNMSSLIGVESLGPRYPKLRVTNNWNFETRREEPNVLSIDCEESVRSFDASQYSDGHSISSDDNLFQLPDLEKDLMVRNSSPRLTITSIDAAQNDLDQQNIEDQDEQDYCKEVRCIELEEPITNQHTHTNSKYLRSNTYSDSSASSPRAKTDLPGLIVVDDVNKNDTDFCSSGLKEDKRVNHLREYFALPTPESSTPWLTENNRISSSSSSRPSRLSLSRSRSCKASLMKNLPSDWFEDDEEIQNTPPVGNEKDFAGRPEGFLKKVHTLNYNANAERNSMESSAADESGTNGLLTPKRKETENLKRLNLLADHEVPGIELDAIMSAKNVKDIGLDPMQADGENHSEWPLKFKRLQKEIIELWDACNVSLVHRTYFFLLFKGDPLDSIYLEVEHRRLLYLKQTFSQGNKTLQDGRTLTPETSMRYLRRERQMLCKQMQKKLSKYDREDLYMKWSIHLSSKHRRLQLAHHLWTDTNNIDHIRESAAVVAKLVGPVEPEQALKEMFGLNFAPRSTSRKSFSWSFTNSMRQIL* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0854 956 MobiDBLite consensus disorder prediction 703 724 - -
Mtr5g0854 956 Pfam Domain of unknown function (DUF3490) 777 936 IPR021881 -
Mtr5g0854 956 ProSitePatterns Kinesin motor domain signature. 243 254 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr5g0854 956 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 3 956 - -
Mtr5g0854 956 MobiDBLite consensus disorder prediction 554 576 - -
Mtr5g0854 956 SMART kinesin_4 18 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0854 956 CDD KISc_CENP_E 21 344 - -
Mtr5g0854 956 MobiDBLite consensus disorder prediction 618 647 - -
Mtr5g0854 956 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 376 IPR027417 -
Mtr5g0854 956 MobiDBLite consensus disorder prediction 554 578 - -
Mtr5g0854 956 MobiDBLite consensus disorder prediction 703 725 - -
Mtr5g0854 956 Coils Coil 391 425 - -
Mtr5g0854 956 Coils Coil 353 373 - -
Mtr5g0854 956 Pfam Kinesin motor domain 26 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0854 956 PANTHER CENTROMERE PROTEIN E 3 956 - -
Mtr5g0854 956 MobiDBLite consensus disorder prediction 620 647 - -
Mtr5g0854 956 Gene3D Kinesin motor domain 10 375 IPR036961 -
Mtr5g0854 956 PRINTS Kinesin heavy chain signature 99 120 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0854 956 PRINTS Kinesin heavy chain signature 208 225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0854 956 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0854 956 PRINTS Kinesin heavy chain signature 294 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0854 956 ProSiteProfiles Kinesin motor domain profile. 20 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0854 Mtr-Chr5 8412820 8418835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0854 18 374 Miscellaneous Gene Families AT5G06670 44.110 8.07e-85 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0854 K11498 - gmx:100809766 1379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0854 5 8412820 8418835 Mtr8g2429 8 34726735 34734444 ECH
Mtr3g4240 3 56261811 56270146 Mtr5g0854 5 8412820 8418835 ECH
Mtr5g0854 5 8412820 8418835 Mtr5g0854 5 8412820 8418835 ECH
Mtr4g2169 4 35254014 35260973 Mtr5g0854 5 8412820 8418835 ECH
Mtr5g0854 5 8412820 8418835 Mtr8g2429 8 34726735 34734444 PCT