Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4240 ATGAGCGAGGAGCAAGGAGGAAACAATGTTCCTTATTCAAATGGCAAAGAAGAGAGAATCTATGTTGCAATTAGAGTAAGGCCTTTGAATGAAAAAGAAAAAACGAGGCAGGATGTTTCAGAATGGGAATGTGTTTCTCATAGCACGATCAAATTCAAGAACAATGGTCATGCAGAACAGCGATCATCGCCGGATACATATACATTTGATAGGGTATTTGGAGAAAAATGTCCCACTAAGCAGGTTTATGAGCAAGGGATTAAGGAAGTTGCCCTTTCAGTAATTAGGGGTATCAACTCTAGCATTTTCGCGTATGGGCAAACAAGCAGTGGAAAGACATATACCATGACTGGAATTACTGAACTTGCAGTGAAGGATATCTATGAATACATAGAAAAGCATAAAGAAAGAGAGTTTATTGTGAAGTTCTCTGCCTTGGAAATATATAATGAAGCTGTTAGAGACCTTCTTAATTCAAATGCTACCACACTAAGACTCCTAGATGATCCAGAGAAAGGGACTGTTGTTGAGAAACTTACTGAGGAGACTCTGACAGAGAGGAGTCAATTGCAGCAACTTATTTCAAAATGTGCAGCTGAAAGGACAACAGAAGAAACTGCCATGAATGAAACAAGCTCCAGATCTCATCAAATTCTTCGATTGACACTTGAAAGCAATCCTAGTGATTTTGTAGGCACTGCAAGATCTGGCGCACTTTTTGCCAGTGTGAATTTTGTTGATCTGGCAGGAAGTGAGCGTGCTTCTCAAGCATTATCAGCAGGCACAAGGTTGAGAGAAGGTAGTCACATAAATCGCAGTTTACTAACCCTCGGAACCGTAATCCGAAAACTAAGCAAGGAAAAAAATGGGCACATACCTTACAGAGATTCTAAGCTTACTCGCATTCTGCATAACTCTTTAGGAGGCAATGCCAGAACAGCCATCATTTGTACAATTAGTCCTGCACGCAGCCAGATTGAGCAATCAAAAAATACTCTATTTTTTGCTAGTTGCGCAAAGCAGGTGACTACTAATGCTCGGGTCAACGTCGTCATGTCAGACAAGCTTTTGGTAAAGCAGCTACAAAATGAATTGGCTAGAATGGAGAATGAGTTAAAGAGCTTAAGTACCATCATACTTAAGGAAAGGGAACATCAAATTGAACAGAAGGATAAGGAGATCAAAGAATTAACTAGACAACGTGATCTCTTTCAAAATTTGCTCCAATCAGTTGGGAAAGATCAAGTTTTAAGAGTAGATCAAGATTGGGCCTCAGAATGGTCAGGTGTTTCTAATGATCTTAGTCCGGTTACAAATGTCATTCCTGAGAATCTTGACAGAACAACATCTGGTTCGTCTATTTCTAATGAGAACCTTTTCAAGCAACCTGAGTATTCTGAAGACAACTTTCTCTTGGACGGTTGTCCTCCGACATTTGTTGGGCCCGATCCTTGTCAAGGTTGGGAGGAGATGGCTAGCAGATCTGAATTTGAAGATAGCTTCAAGGAATTACCGTGCGTTGAAATAAAAGAAGTGGAAAAAGAGGACAAACCAGATATTAATATGCCTATTTCTACTTTTGAAGAAAGGGAAGGATCCACTCATGCTTTTGAAGAAAGTGAAGGAAATTCACCCATGATTCAATTTGTGGAAGTAGATGGTAAATCACCCATGGGGAGTGGACATAGTGATCAAGATGCTCCTCAGCAAAAAATTGAGGACATTAAAAGGACCAACAACCATCATGTAAACCACACAGAGAAATTTAATGACTCATTTGAATCTGAAACTTGTTGTATGGCTACCATATCTCTTCCTCAGGTAGAATGTAAATCATCTATATGGAATGGGCATAGTGATCAAGATGCTCCTCAGGAAAAAATTGAGGACATTAAAAGAACCAACATCCATCTTGCAAACCATACAGAGAAATCCAATGACTCATTTGAATCGGAAACGTGTTGTATGGCTCCCATGTCTCCTCCTCAGGTAGAACGTAAATCATCTACAGAGAATGGGCATAGTGGTGAAGATGCTCCTAAGCAAAAAATTGAGGACATTAAAAGGACCAACAATCATATTGTGAACCTCAAAGAGAAATCTATTGATTCATTTGAATCTAAACCATGTTGCATGGATGCAATGTCTCTCCCTCAGGTAGAATGTAAATCATCTATATGGAATGGGCATAGTGATCAATATGCTCCTCAGAAAAAAATTGAGGACGTTAAAATTACCAACCACCATCTTGTGTACGTATCAGAGAAATCTAATGACTCATATGAATCAGAATCCTTTTGCATGACAGCCCCGTCTCATCCTCTGGTAGAATGTAAATCATCTAAAGGGGATGAGCATAATGATCAAGATGATCCTCAACTAAAAATTGAGGACATTAAAAGGACCAATGACCTTGCGAACATCACACATGAATATAATGATTCGTTTGAGCCTGAACCCTGTTGCATAGCTGTCATGTCTCCTCCTCAGGCAGAACCTAAATCATCTACATGGAACGAGTGTGATGTTCAAAATGCTCCTCGGCAAAAAACCGAGGACATTGAAAGAACCAATGACCGTCTTGTGAACCTCAAAGAGAAATCTAAAGACTCGTTTCAATTTGAACCATGTTTCATGGATGCCATGTCTCCTCGACATGTCGAACCTAACTCATCTATAATGAACGGGCATAGTGATCAAAATGCTCCTCGTCAAAAAATTGAAGACATTGAAATGACCAACGACCATCTTGTGAACATCGCATATAAATCTAATGACTCATTTAAATATGAACCCTATTGCATGGTTGCCATGTCTCCTTCTCGGTCAGAACCTAAATCATATAGAAGAAACAGAGATAGTGATCAAAATGCTCCTCACAAGAAAATTGAGGACATCGAAAGGACCAACGGCCATCTTGTGAACCTCCCAGAGAAATCTAATGACCCATCAGAACATGAATCATGTTCCATGGTTGTCGTGTCTCCTCGTCAGGTAGATTGTAAATCATCTACAGGGAATGGACATAGTGATCAATATGTTCCTCAACAAAAAATTGAGGACATTAAAAGGACGAACGACCATCTTGTGAACCTATCAGAGAAATCTATTGACTCATTTGAATCGGAACCCTGTTGCATGGCTGCCATATCTCTTCCTTTTGTAGATGGCAAGTCATTTGTAGGGAATGGGCATAGTGATCAAGATGCTCCTCAACAAAAAACTGAGGATATTAAAAGGACCAAAGACCATCTTGTTAACATCTCAACTAAATCTAACGATTCATTTGAATCTGAACCCCGTTGCATGACTGCCATGTCTCTTCCTCAGGTAGATGGTAAATCTTCTATAGGGAATGGACATAGTGATCAAGATGCTCCTCAGCGAAAAGTTGAGGACATTAAAAGGTCCAGTGACCATCTTGTGAACCTCTCAGAGAAATCTAATGACTCATTTGAATCCAAATCGCGTTGTATGGCTGCCATTTCTCCTCCTCGGGTAGATAAGGTGGATCAGGAAAATTCATCGCATTCTCAGTTCCTTAAGTTGGAGCAGAATATGTCACCTTCTTCGTCCAATAAGCTAGACCAGGAACCCACATCACCTCATCAGTTTGATCAGGAAGACCTTAAAACTATATCACCTCCTCAACTTGATGACATGGAACAAGTATCATTCAAAGCATCAGCTGGTGCTGAAAAGGAATACTTTTTGGAATGCTTTCCTGAGAAGTTATCTGAACCGAAGTTACGTGCTAAAAGAAGAAAAACTTCAAAAAAATCTTCTATAATTCACGAGATGAATGCTTCAGTAGAAGATGCAGAATCTGTTATGGATTCTGATACGGAGGAAACTTCCAGCGTCCTTAGTTTTGTAGTAAGAATGGATGAAAGTCTAAAACCAAAACCAGTGGTCAAAGACATTGATAATCTTATGGTACCTATGAGAACACCTCCAATCAACAAAAATGTGAACAGAGTAAGAGGTCTCAGTTTACCCGGAGTTTGGGGGACTTTAATACCCTCTAAATTTGAGATGCAGCAAAGAGATATAGTCGAACTTTGGGATGCATGCAATGTGCCACTCGTACATAGGTCCTATTTTTTCCTTCTCATCAAAGGTGAACTTTCAGATTCTGTGTACTTGGATGTAGAGCTCAGACGTTTGTCCTTTTTAAAGGACACTTTTTCTAGTGGAAATCAAACTACAGGAGTAGAAGGTCATGATGTCACACCCAATTCGAGCCTGCTGTCTCTAACCCGTGAGAGGAAAATGCTCAGTAAGCAAGTGCATAAGAAGTTTTCGAGGAAGGGAAGAGAGGAACTATACCTGAAGTGGGGTATTGATTTGAAGACAAAACACAGAAGTATACAATTGGCATGGCTCATATGGACGGATACAAGAGATTTGAACCACATAAGAGAAAGTGCTGCGCTTGTTGCAAAGTTGGTTGGTTTTATTAACACGGGTGAGACCTCAAAGAAAACTTTTGGATTTGGCTTCTTAAGCCGACGTAAGAGCATAAAATCCCTTAGTTGGAAGGACACAATGTCTACCCTTTAA 4563 0.3991 MSEEQGGNNVPYSNGKEERIYVAIRVRPLNEKEKTRQDVSEWECVSHSTIKFKNNGHAEQRSSPDTYTFDRVFGEKCPTKQVYEQGIKEVALSVIRGINSSIFAYGQTSSGKTYTMTGITELAVKDIYEYIEKHKEREFIVKFSALEIYNEAVRDLLNSNATTLRLLDDPEKGTVVEKLTEETLTERSQLQQLISKCAAERTTEETAMNETSSRSHQILRLTLESNPSDFVGTARSGALFASVNFVDLAGSERASQALSAGTRLREGSHINRSLLTLGTVIRKLSKEKNGHIPYRDSKLTRILHNSLGGNARTAIICTISPARSQIEQSKNTLFFASCAKQVTTNARVNVVMSDKLLVKQLQNELARMENELKSLSTIILKEREHQIEQKDKEIKELTRQRDLFQNLLQSVGKDQVLRVDQDWASEWSGVSNDLSPVTNVIPENLDRTTSGSSISNENLFKQPEYSEDNFLLDGCPPTFVGPDPCQGWEEMASRSEFEDSFKELPCVEIKEVEKEDKPDINMPISTFEEREGSTHAFEESEGNSPMIQFVEVDGKSPMGSGHSDQDAPQQKIEDIKRTNNHHVNHTEKFNDSFESETCCMATISLPQVECKSSIWNGHSDQDAPQEKIEDIKRTNIHLANHTEKSNDSFESETCCMAPMSPPQVERKSSTENGHSGEDAPKQKIEDIKRTNNHIVNLKEKSIDSFESKPCCMDAMSLPQVECKSSIWNGHSDQYAPQKKIEDVKITNHHLVYVSEKSNDSYESESFCMTAPSHPLVECKSSKGDEHNDQDDPQLKIEDIKRTNDLANITHEYNDSFEPEPCCIAVMSPPQAEPKSSTWNECDVQNAPRQKTEDIERTNDRLVNLKEKSKDSFQFEPCFMDAMSPRHVEPNSSIMNGHSDQNAPRQKIEDIEMTNDHLVNIAYKSNDSFKYEPYCMVAMSPSRSEPKSYRRNRDSDQNAPHKKIEDIERTNGHLVNLPEKSNDPSEHESCSMVVVSPRQVDCKSSTGNGHSDQYVPQQKIEDIKRTNDHLVNLSEKSIDSFESEPCCMAAISLPFVDGKSFVGNGHSDQDAPQQKTEDIKRTKDHLVNISTKSNDSFESEPRCMTAMSLPQVDGKSSIGNGHSDQDAPQRKVEDIKRSSDHLVNLSEKSNDSFESKSRCMAAISPPRVDKVDQENSSHSQFLKLEQNMSPSSSNKLDQEPTSPHQFDQEDLKTISPPQLDDMEQVSFKASAGAEKEYFLECFPEKLSEPKLRAKRRKTSKKSSIIHEMNASVEDAESVMDSDTEETSSVLSFVVRMDESLKPKPVVKDIDNLMVPMRTPPINKNVNRVRGLSLPGVWGTLIPSKFEMQQRDIVELWDACNVPLVHRSYFFLLIKGELSDSVYLDVELRRLSFLKDTFSSGNQTTGVEGHDVTPNSSLLSLTRERKMLSKQVHKKFSRKGREELYLKWGIDLKTKHRSIQLAWLIWTDTRDLNHIRESAALVAKLVGFINTGETSKKTFGFGFLSRRKSIKSLSWKDTMSTL* 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4240 1520 MobiDBLite consensus disorder prediction 945 961 - -
Mtr3g4240 1520 MobiDBLite consensus disorder prediction 670 690 - -
Mtr3g4240 1520 MobiDBLite consensus disorder prediction 1063 1132 - -
Mtr3g4240 1520 PANTHER KINESIN-LIKE PROTEIN KIN-7J 13 655 - -
Mtr3g4240 1520 PANTHER KINESIN-LIKE PROTEIN KIN-7J 901 1519 - -
Mtr3g4240 1520 ProSiteProfiles Kinesin motor domain profile. 19 342 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g4240 1520 Gene3D Kinesin motor domain 11 373 IPR036961 -
Mtr3g4240 1520 CDD KISc_CENP_E 20 342 - -
Mtr3g4240 1520 MobiDBLite consensus disorder prediction 658 690 - -
Mtr3g4240 1520 ProSitePatterns Kinesin motor domain signature. 241 252 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr3g4240 1520 Pfam Kinesin motor domain 25 342 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g4240 1520 SMART kinesin_4 17 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g4240 1520 MobiDBLite consensus disorder prediction 1137 1156 - -
Mtr3g4240 1520 MobiDBLite consensus disorder prediction 1109 1123 - -
Mtr3g4240 1520 MobiDBLite consensus disorder prediction 1183 1208 - -
Mtr3g4240 1520 PANTHER CENTROMERE PROTEIN E 13 655 - -
Mtr3g4240 1520 PANTHER CENTROMERE PROTEIN E 901 1519 - -
Mtr3g4240 1520 Coils Coil 380 407 - -
Mtr3g4240 1520 Pfam Domain of unknown function (DUF3490) 1343 1503 IPR021881 -
Mtr3g4240 1520 Coils Coil 351 378 - -
Mtr3g4240 1520 MobiDBLite consensus disorder prediction 1070 1087 - -
Mtr3g4240 1520 MobiDBLite consensus disorder prediction 940 961 - -
Mtr3g4240 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 377 IPR027417 -
Mtr3g4240 1520 PRINTS Kinesin heavy chain signature 97 118 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g4240 1520 PRINTS Kinesin heavy chain signature 206 223 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g4240 1520 PRINTS Kinesin heavy chain signature 242 260 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g4240 1520 PRINTS Kinesin heavy chain signature 292 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4240 Mtr-Chr3 56261811 56270146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4240 17 375 Miscellaneous Gene Families AT5G06670 40.599 2.87e-76 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4240 K11498 - gmx:100785448 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4240 3 56261811 56270146 Mtr5g0854 5 8412820 8418835 ECH
Mtr3g4240 3 56261811 56270146 Mtr8g2429 8 34726735 34734444 ECH
Mtr3g4240 3 56261811 56270146 Mtr3g4240 3 56261811 56270146 ECH