Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0819 ATGTTTTCTCAAAGAGAAATGCCTTCACCATCTACAATTTTCTCAGCTTATGCATCCATGACAGCTTCCATCATGCTGCTTCGTTCCATGGCACAAGAACTCATCCCTCAACCAATTCGTGGCTACCTTTACAACACCTTCCGCTACCTCATTAAACCACGTTCCCCTACACTCACACTCATCATAGAAGAATCAACAGGCATAACACGTAACCAAGTTTATGATGCAGCTGAGTCTTATCTCTCAACTAAAGTCACCCCTGAAAATGAAAGACTCAAAATCAGCAAAGTCCCAAAAGAGAAAAAACTCACTATTCGGTTAGAAAAAGGCGAAAAATTAACCGATATTTACAACGGTTTTCCTCTCAAATGGAGATTCATTTGTGCTGAAACTGAGAAAAACAGTGCAAATGATATGCACAACAATAATAACAGTGTATCTGTTAGATCAGAGAAAAAATATTTTGAACTAAGTTTTCACAAAAAGTATAAGGAAGTTGTTTTGGATTCTTATCTTCCTTTCATTCTTGATAAAGCTAAAGAAATGAAAGATGAAGAAAGAGTGTTGAAAATGCATACATTAAACACTGCTTATTGTTATAGCGGTGTGAAATGGGATTCAATAAATCTTGAACATCCTTCAACATTTGAAACACTTGCTATGGAGCCAGACATGAAGAATGTTATTATAGAAGATTTGAACATGTTTGTGAAGAGAAGAGAGTTTTATAAGAAAGTTGGTAGGGCTTGGAAACGTGGTTATTTGTTGTATGGTCCTCCAGGAACTGGGAAATCTAGTTTGATTGCTGCTATGGCTAATTATTTGAAGTTTGATATATTTGATCTTCAACTTGGTAACATTGTTAGAGATTCTGATCTTAGAAAGTTGCTTCTTGCTACTGCTAATAGGTCTATTTTGGTTATTGAAGATATTGATTGCAGTATTGATATTCCTGAGAGGAGGCATGGAGAAGGACGTAAACAGCAAAATGATATACAGTTGACACTATCTGGATTATTGAACTTTATAGATGGATTATGGTCAAGTTGTGGAGACGAGAGAATCATCATATTTACAACTAACCACAAAGAAAGATTGGATCCAGCACTTTTAAGGCCAGGAAGAATGGACATGCACATTCACATGTCTTATTGTTCTTATGAAGGTTTCAAAATTTTAGCTTCAAACTACTTGGATATTTCCCATGATAACCCTTTCTTTGGAGAGATTGAAGGACTAATTGAAGACATACAAATAACACCTGCACAAGTTGCCGAGGAATTGATGAAGAACGAAGACGCGGAGGCGACGCTGGAAGGATTTGTGAAGTTGTTGAAGAGGAAGAAAATGGAAGGTGATGTGTGTGAGAATAATAACAATAAAATAGAACAACAGTCTAAAAAGCGTAAGGTGGTTGGTTGCAAGCAAAAACGAGGTGGTGGGAATAGCAAGAGCAATGTTGTTGTTACTCAAAGAAGGACAAGAGGTTATAAAAGAGGTTCTAGTTTGTAA 1512 0.3651 MFSQREMPSPSTIFSAYASMTASIMLLRSMAQELIPQPIRGYLYNTFRYLIKPRSPTLTLIIEESTGITRNQVYDAAESYLSTKVTPENERLKISKVPKEKKLTIRLEKGEKLTDIYNGFPLKWRFICAETEKNSANDMHNNNNSVSVRSEKKYFELSFHKKYKEVVLDSYLPFILDKAKEMKDEERVLKMHTLNTAYCYSGVKWDSINLEHPSTFETLAMEPDMKNVIIEDLNMFVKRREFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQLGNIVRDSDLRKLLLATANRSILVIEDIDCSIDIPERRHGEGRKQQNDIQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYEGFKILASNYLDISHDNPFFGEIEGLIEDIQITPAQVAEELMKNEDAEATLEGFVKLLKRKKMEGDVCENNNNKIEQQSKKRKVVGCKQKRGGGNSKSNVVVTQRRTRGYKRGSSL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0819 503 Gene3D - 203 380 IPR027417 -
Mtr5g0819 503 MobiDBLite consensus disorder prediction 479 503 - -
Mtr5g0819 503 Gene3D - 381 452 - -
Mtr5g0819 503 PANTHER BCS1 AAA-TYPE ATPASE 6 463 - -
Mtr5g0819 503 MobiDBLite consensus disorder prediction 465 503 - -
Mtr5g0819 503 CDD AAA 251 384 - -
Mtr5g0819 503 SMART AAA_5 250 386 IPR003593 -
Mtr5g0819 503 ProSitePatterns AAA-protein family signature. 354 372 IPR003960 GO:0005524|GO:0016887
Mtr5g0819 503 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
Mtr5g0819 503 Pfam ATPase family associated with various cellular activities (AAA) 255 383 IPR003959 GO:0005524|GO:0016887
Mtr5g0819 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 434 IPR027417 -
Mtr5g0819 503 PANTHER BNAA10G17020D PROTEIN 6 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0819 Mtr-Chr5 8063137 8066960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0819 243 428 Miscellaneous Gene Families AT3G02450 32.995 2.61e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0819 - - gmx:100789621 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0819 5 8063137 8066960 Mtr8g2469 8 35109493 35112456 ECH
Mtr5g0819 5 8063137 8066960 Mtr5g0819 5 8063137 8066960 ECH