Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0789 ATGAAACGAACTCGATCTCAAATCAAATCCAACCCCACACCCATCACAAATCCACAACCCCCAATCAAAACCTTAATCTCTTCAAAAATCACCTTCCCCGCCAAAAAAATCCTTAAACCCACCATCAAAACCAAAGAAGAAGTGAAAAAACCACACTTTCCCCTTCTCACACCAATAATCCAAAAACCATTAACATCACAAAACGAAATCACCGCCGCACTCAACCACCTCCGCGCTGCTGACCCACTCCTTTCCACCATCATCAACACCTTCCCTCCACCCCAATTCTCAAACTCAAACGCTATCACACCTTTCTTCTCTCTCATCAAAACCCTAATCTCCCAACAACTCTCCATCAAAGCATCCTCTTCAATCGAACAACGCTTCATCTCGCTCTTCACCAACCAATGTTCCATCCTCCCAAACACCGTTTTATCCGTTACACCGGACACTCTTCGTTCCGTTGGAATCTCGGCGCGAAAAGCAACCTACATTCACGACCTAGCAACCAAGTACGCTGATGGGTTTTTATCGGATTCATCGATTGTTGAAATGGACGATGAAATGCTTTACGAGAAACTAATGTCGGTTAAGGGAATTGGACCGTGGTCGGTTCATATGTTTATGATATTTACGCTTCATCGTCCTGATGTTTTGCCTGTTGGTGATCTTGTTGTGAGAAGAGGTGTTGAGAAATTGTATGGTCTTAAGGTTTTGCCTTCTCCTGAAAAAATGGAGGGTTTGTGTGAGAAATGGAAGCCTTATAGGTCTGTTGGGTCTTGGTATATGTATAGGTTTGTTGAAGCTAAAGGGGTTTTACCAAATCCCACCACTACTACTACATAG 846 0.435 MKRTRSQIKSNPTPITNPQPPIKTLISSKITFPAKKILKPTIKTKEEVKKPHFPLLTPIIQKPLTSQNEITAALNHLRAADPLLSTIINTFPPPQFSNSNAITPFFSLIKTLISQQLSIKASSSIEQRFISLFTNQCSILPNTVLSVTPDTLRSVGISARKATYIHDLATKYADGFLSDSSIVEMDDEMLYEKLMSVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVEKLYGLKVLPSPEKMEGLCEKWKPYRSVGSWYMYRFVEAKGVLPNPTTTTT* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0789 281 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 1 279 - -
Mtr5g0789 281 Pfam HhH-GPD superfamily base excision DNA repair protein 109 253 IPR003265 GO:0006284
Mtr5g0789 281 MobiDBLite consensus disorder prediction 1 20 - -
Mtr5g0789 281 CDD ENDO3c 108 266 IPR003265 GO:0006284
Mtr5g0789 281 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 279 - -
Mtr5g0789 281 SUPERFAMILY DNA-glycosylase 99 266 IPR011257 GO:0003824|GO:0006281
Mtr5g0789 281 SMART endo3end 113 268 IPR003265 GO:0006284
Mtr5g0789 281 Gene3D - 75 265 - -
Mtr5g0789 281 Gene3D Hypothetical protein; domain 2 101 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0789 Mtr-Chr5 7782659 7784672 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0789 K01247 - cit:102629620 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4187 3 55781073 55785535 Mtr5g0789 5 7782659 7784672 ECH
Mtr5g0789 5 7782659 7784672 Mtr5g0789 5 7782659 7784672 ECH