Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4187 ATGGGCGAAGACACACAACAACAACCTCAGCCACAACCACAAGGGGTTTCTTCCGACAACACAATCTCCGCCACCACCGCTGTCGACTCCGTCCAAACTATTATCCCCGTCGAATCCGAACTGAGCAATGTTCCACCACACACCAAAGCCCCTGCCACAAAAATGCCCCTCCGTCCTCGTAAGATCCGAAAGGTCTCGCCCGACCCAACAACCTCCGAATCTCAATCGGAAACCCTAAAACCACCCAATTCCACCGCCGCCGGAAAATCCAACGGACGGAACAACAAAACGGTTCAACCACCACAACAACGAACCCTAGCTGTTCCGAAAATCGTACCTAGGTCACTTTCGTGCGAAGGTGAAGTTGAGATTGCAATTCGTTACCTTCGTTCCGCAGACCCACTCTTATCACCTCTCATCGACATTCATCAACCACCCACGTTTGATAATTTTCAAACCCCATTCCTTGCCCTAACCCGTAGTATCTTGTATCAACAACTCGCTTTTAAAGCCGGTACTTCCATCTATACGCGGTTTATTGCTCTTTGTGGTGGTGAAGCTGGTGTTGTTCCTGATAATGTTCTTGCCCTAACTGCTCAACAGCTTCGTCAAATTGGGGTTTCTGGTAGAAAAGCTAGTTATCTTCATGATTTGGCTAGGAAGTATCAGAATGGGATACTTTCTGATTCCGCTATTGTAAATATGGATGATAAATCGCTTTTCACTATGCTTACTATGGTTAATGGGATTGGTTCTTGGTCTGTTCATATGTTTATGATTTTCTCACTGCATAGACCGGATGTTCTTCCGATTAATGATCTTGGTGTTCGGAAAGGGGTTCAGATTCTTTATAATCTTGATGACTTGCCTCGGCCATCTCAGATGGATCAATTATGTGAGAAGTGGAAGCCTTATCGGTCGGTTGCTTCATGGTATTTGTGGAGGTTTGTTGAAGCAAAGGGAAGTCCTTCGACTGCTGTGGCTGTTGCCACTGGCAACGGCTTGCAACAGCATGAGCTGGACCACCATCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCATTCACAACAACCAATTATGGATCCCATGAATAACATGTTTAATATGGGGGCTGCCTGTGCTTGGGGACAGTGA 1134 0.4691 MGEDTQQQPQPQPQGVSSDNTISATTAVDSVQTIIPVESELSNVPPHTKAPATKMPLRPRKIRKVSPDPTTSESQSETLKPPNSTAAGKSNGRNNKTVQPPQQRTLAVPKIVPRSLSCEGEVEIAIRYLRSADPLLSPLIDIHQPPTFDNFQTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPDNVLALTAQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQILYNLDDLPRPSQMDQLCEKWKPYRSVASWYLWRFVEAKGSPSTAVAVATGNGLQQHELDHHQQQQQQQQQQHSQQPIMDPMNNMFNMGAACAWGQ* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4187 377 MobiDBLite consensus disorder prediction 1 104 - -
Mtr3g4187 377 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 5 371 - -
Mtr3g4187 377 SUPERFAMILY DNA-glycosylase 144 316 IPR011257 GO:0003824|GO:0006281
Mtr3g4187 377 Pfam HhH-GPD superfamily base excision DNA repair protein 160 303 IPR003265 GO:0006284
Mtr3g4187 377 MobiDBLite consensus disorder prediction 337 363 - -
Mtr3g4187 377 SMART endo3end 163 318 IPR003265 GO:0006284
Mtr3g4187 377 Gene3D Hypothetical protein; domain 2 152 265 - -
Mtr3g4187 377 MobiDBLite consensus disorder prediction 68 104 - -
Mtr3g4187 377 CDD ENDO3c 155 316 IPR003265 GO:0006284
Mtr3g4187 377 MobiDBLite consensus disorder prediction 1 39 - -
Mtr3g4187 377 PANTHER BNAC05G15000D PROTEIN 5 371 - -
Mtr3g4187 377 Gene3D - 128 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4187 Mtr-Chr3 55781073 55785535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4187 K01247 - gmx:100790760 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4187 3 55781073 55785535 Mtr5g0789 5 7782659 7784672 ECH
Mtr3g4187 3 55781073 55785535 Mtr3g4187 3 55781073 55785535 ECH