Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0450 ATGATGCAATTCAGTTCAAGTACCTTACCTGCTCATAATCTCCACAAATTTCAAGCACTAAGATGTCCTAGTTTTAGATGCCACTCTTCTTCCATCAAACAACAACCTTCATCTTTTGCTTCTCTTCAAACCAATAACTCATCTAGGTCATCACATCTCTCAAATTTAGATAAGTTTCTTGATATCCAAAAAAAGCCTTTGGAATCATCATCAACCAACCAGTTTCAACAACCAATACAACCTATACAAAAAAGTGACAAAAAAGGTAAAAACTTTCTTGAAGGACTTAACCTAGCAAAACTATGGCCAGATATCAAAGCAGCTGAAGAAATCTCCCCTCGCCACCTGAAACGCTTACAGCGTCTTCTTTCCAAGACGGCTGAGTATTCTCCAAGAAATATCATAGGGAGAAAGTGGAGGGAATATCATGGCAGCAATGACTGGAAGGGGATGTTGGATCCCTTGGATGACAACCTCCGGCGAGAGGTTGTTAGATATGGCGATTTGGTTCAAGCTGCTTATCAAGCTTTTCATGCTGATCCTGCCATGTCAACAACTGAAGCACCCCATCACCAACAGGTGTCGTTGCCGGAGAGATCTTATAAAGTAACCAAGAGTCTGTATGCCACATCATCAATTGGATTACCTAAATGGGTTGATGAGGTGGCTCCAGATCTTGGTTGGATGACCCAGCGTTCTAGCTGGGTCGGATATGTTGCAGTTTGCGACGATAAAAGAGAGATTGCAAGAATGGGACGAAGAGATATTGTGATATCTCTTCGTGGAACTTCCACTTGTCTAGAATGGGCTGAAAATATGAGGGCCCAATTAGTCGATTTACCCGAGGATGCTCAGACACAGACTCAAACACAGACCCAATCAAAGCCCAAAGTTGAGTGTGGGTTCATGAGCTTGTACAAAACAAAAGGGGCTCATGTGCAAAGCCTATCCGAGTCCGTTGTTGAAGAAGTGCGACGCCTTATTGAACTTTACAAAGGCGAAGAATTAAGCATAACCGTTACGGGACATAGCCTTGGTGCGACACTAGCACTATTGGTGGCCGAGGAAATTAGCACGTGTGCACCAAACGTGCCACCCGTGGCTGTTTTTTCATTTGGCGGACCTCGTGTTGGTAACAGAGCCTTTGGAGAACATCTTGAAAAGAAAAACGTGAAAGTTCTTAGAATAGTGAACACACAAGATGTGATTACAAGGGTGCCAGGAATATTTTTAAGCGAGGAGCTTGAAGAAAAAATTAAGAACTCTAAGGTTGTTAGTGGAGTTGTTGATATGTTGGAAGAGAACACTCCTTTGGGATATTCACATGTTGGAACTGAATTACGTGTTAATACTAAGATGTCACCATACTTGAAGCCCGATGCTGACATAGCTTGTTGTCATGATCTAGAGGCTTATTTACATTTAGTGGATGGGTATATGGCATCTAATTGTCCATTTAGAGCTAATGCTAAGAGAAGTTTAGCTAGATTAATGCAAGATCAAAGTGCTAATGTAAAAAAGTTGTATACTAGTAAGGCTAAAGGCTTGTCTGTTAATCTTAATAGACAAGGATCTAACTTGTCTAATCTTAGTAGACAGGGATCCATGTCTATGGCTGCTTGTTGTCCTAGTCCATCATCTTCATGA 1647 0.4159 MMQFSSSTLPAHNLHKFQALRCPSFRCHSSSIKQQPSSFASLQTNNSSRSSHLSNLDKFLDIQKKPLESSSTNQFQQPIQPIQKSDKKGKNFLEGLNLAKLWPDIKAAEEISPRHLKRLQRLLSKTAEYSPRNIIGRKWREYHGSNDWKGMLDPLDDNLRREVVRYGDLVQAAYQAFHADPAMSTTEAPHHQQVSLPERSYKVTKSLYATSSIGLPKWVDEVAPDLGWMTQRSSWVGYVAVCDDKREIARMGRRDIVISLRGTSTCLEWAENMRAQLVDLPEDAQTQTQTQTQSKPKVECGFMSLYKTKGAHVQSLSESVVEEVRRLIELYKGEELSITVTGHSLGATLALLVAEEISTCAPNVPPVAVFSFGGPRVGNRAFGEHLEKKNVKVLRIVNTQDVITRVPGIFLSEELEEKIKNSKVVSGVVDMLEENTPLGYSHVGTELRVNTKMSPYLKPDADIACCHDLEAYLHLVDGYMASNCPFRANAKRSLARLMQDQSANVKKLYTSKAKGLSVNLNRQGSNLSNLSRQGSMSMAACCPSPSSS* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0450 548 MobiDBLite consensus disorder prediction 68 84 - -
Mtr5g0450 548 SUPERFAMILY alpha/beta-Hydrolases 230 479 IPR029058 -
Mtr5g0450 548 CDD Lipase_3 202 477 - -
Mtr5g0450 548 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 2 522 - -
Mtr5g0450 548 Gene3D alpha/beta hydrolase 138 527 IPR029058 -
Mtr5g0450 548 Pfam Lipase (class 3) 257 409 IPR002921 GO:0006629
Mtr5g0450 548 PANTHER GLYCEROLIPASE A1 2 522 - -
Mtr5g0450 548 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0450 Mtr-Chr5 4171481 4173307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0450 25 548 Acyl Lipid Metabolism Gene Families AT4G16820 55.263 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0450 - - gmx:100806573 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0450 5 4171481 4173307 Mtr1g3993 1 51543070 51548391 PCT