Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3993 ATGAGACTAAACGGAGAAATCTCAAGCGAAGAAGAAGAAGAAGTGATGGAGAAATCTGAGGTGAGTACGACACCGTTTTTGGGTCAGAAAATTGTTGTTGGATATGCTTTAACTGCGAAGAAGAAGAAAAGTTTTCTTCAACCAAATTTCATTTCTCTTGCAAGGAGCAAGGGGATATACTTTGTTAACATTGATCTAAACAAGCCACTGTCAGAACAAGGTCCATTTGACATTGTCTTGCACAAGTTGTTAGGCGAGGAATGGCGAGAGATTATTGAGGATTTCAGGCAAAAACATCCCGATGTATTCGTTCTTGATCCTCCAGATGCAATTCAACATTTACACAACCGCCAATCCATGCTTCAAGATGTGGTGGATCTAAACTTATCTGAGTGCAATGGCAAGGTTGGCATCCCTCGTCAGCTAGTTATTACAAAAGACAAAGACCCATCTACTATTCCTTATGAAGTCACCAAAGCTGGGTTGAAGTTGCCATTAGTTGCAAAACCTCTAGTTGTGGATGGCAGTGCAAAGTCGCATGAACTGTTTCTTGCTTATGATGAGTTCTCTCTTTCAGAGCTTGAACCTCCACTGGTTCTGCAAGAGTTTGTCAATCATGGTGGTCTTCTCTTTAAGATTTATATTGTTGGGGAATACATAAAGGTTGTGAGGCGTTTCTCTCTTCCTAATATCAGTAAACGCGGGCTATCAAAAGTCGCAGGTGTATACCGTTTTCCAAGAGTTTCATGTGCAGCAGCTTCTGCAGATGATGCTGATCTTGATCCTAGTATTGCCGAACACCCACCAAGACCTTTGCTGGAGAGGCTTGCGAAAGAGCTTCGTCATAGATTGGGACTTCGCTTGTTCAACGTAGATATGATTCGTGAATATGGGACGAAGGATGTGTTTTATGTCATTGATATCAATTACTTTCCTGGGTATGGAAAAATGCCAGACTACGAGCACGTCTTTACAGATTTTCTACTTAACCTAAAGCAGAACAAGTGTAAGAAGAAACTTGCTGCCTAA 1029 0.414 MRLNGEISSEEEEEVMEKSEVSTTPFLGQKIVVGYALTAKKKKSFLQPNFISLARSKGIYFVNIDLNKPLSEQGPFDIVLHKLLGEEWREIIEDFRQKHPDVFVLDPPDAIQHLHNRQSMLQDVVDLNLSECNGKVGIPRQLVITKDKDPSTIPYEVTKAGLKLPLVAKPLVVDGSAKSHELFLAYDEFSLSELEPPLVLQEFVNHGGLLFKIYIVGEYIKVVRRFSLPNISKRGLSKVAGVYRFPRVSCAAASADDADLDPSIAEHPPRPLLERLAKELRHRLGLRLFNVDMIREYGTKDVFYVIDINYFPGYGKMPDYEHVFTDFLLNLKQNKCKKKLAA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3993 342 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 32 111 IPR041429 -
Mtr1g3993 342 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2 1 339 - -
Mtr1g3993 342 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 339 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Mtr1g3993 342 Gene3D - 107 313 - -
Mtr1g3993 342 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 161 317 - -
Mtr1g3993 342 PIRSF ITPK 7 342 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Mtr1g3993 342 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 133 329 IPR040464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3993 Mtr-Chr1 51543070 51548391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3993 K00913 - gmx:100127410 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0450 5 4171481 4173307 Mtr1g3993 1 51543070 51548391 PCT