Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0322 ATGTGCAAGTTATCATCATCATCAACCTCTGTCTCCACTTTGTATGAAAGCAATAACAACCAAACAAATAATATATCCACAACAACCACAATCAAAACACAGAATAATATCAAACCTGACATGTTAACACCATTGATCCCTAAATCCCCAACATTCAAACAACAAAAGAAAACCCATTTTTCTCTTGCCCTCAATGAAGCCAAACATATTTCAAACATAGCATTACCTATGGTTTTAACAGGTTTATTACTTTATTCTCGTTCCATCATTTCAATGTTGTTCCTTGGTCGTGTTGGTGAACTTGCTTTAGCAGGTGGGTCACTTGCCATTGGATTTGCAAACATCACAGGTTACTCCATTCTCTCTGGTCTTGCCATGGGAATGGAACCTATTTGTGGTCAAGCTTTTGGTGCTAAAAGATTCAAACTCCTTGGTTTAACAATGCAAAGAACAGTGATTCTTCTTCTTGTAACTTCAATTTTCATTTCATTCTTATGGCTTAACATGAAGAGATTATTGCTTTTATGTGGCCAACAAGAAGATATTGCAAACGTTGCACAATCTTACATTCTTTATTCTCTTCCTGATCTTGTAGCACAATCATTGCTACACCCTTTGAGAATCTATCTTCGAAGCCAATCCATAACACTTCCTTTAACATACAGTGCTACTTTGTCTATTCTTCTTCACATTCCTATAAACTATTTTCTTGTCAATGTTCTTCAATTAGGAATAAGAGGAATCGCTTTAGGTTCCGTTTGGACGAATTTCAACCTCGTTGTTTCCTTGATTATTTACATTTGGGTTTCTGGAACACACAAGAAAACATGGAGTGGAATTTCCTCTGCTTGTTTCAAAGGATGGAAATCGCTTTTGAATTTAGCAATTCCAAGCTGCATTTCGGTTTGTCTCGAATGGTGGTGGTACGAAATCATGATTTTGCTTTGTGGATTATTGCTTAATCCACATGCAACTGTTGCATCTATGGGTGTGTTGATTCAAACCACTGCATTGATATACATTTTTCCTTCTTCTTTGAGTTTTGGTGTTTCAACAAGAGTTGGAAATGAACTTGGTGCTGAAAATCCACAAAAAGCAAAACTTGCAGCAATAGTAGGACTCTGTTTCAGTTTTGTTTTGGGTTTCTCCGCTTTGTTTTTCGCCTTTTCAGTTAGAAACATTTGGGCTACTATGTTCACAAGTGATCCACAAATAATTGCGTTAACATCAATGGTGTTACCGATTATAGGACTATGTGAGCTTGGAAATTGTCCACAAACAACTGTTTGTGGTGTTTTGAGGGGAACGGCGAGGCCGAAATTAGGCGCAAATATAAATTTAGGTTGTTTTTATCTTGTGGGAATGCCTGTTGCAGTTTGGTTGAGTTTCTTTGCTGGATTTGATTTCAAAGGTTTGTGGTTTGGTCTTATGGCTGCTCAAGGTTCATGTATGATTACAATGTTGTTTGTTTTGGTTCGTACAAATTGGGAAAATCAAGCAGAAAGAGCTAAGGAGTTAACATCATCAGATTCAAGTGAAGAAGAAGAACAAGAAGAAGAGAAAGTGATTGTCAATTCAAGTTCATGTGGCACAAAAGAGTGCTCTGATTCATTAGTTTGA 1620 0.3691 MCKLSSSSTSVSTLYESNNNQTNNISTTTTIKTQNNIKPDMLTPLIPKSPTFKQQKKTHFSLALNEAKHISNIALPMVLTGLLLYSRSIISMLFLGRVGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLTMQRTVILLLVTSIFISFLWLNMKRLLLLCGQQEDIANVAQSYILYSLPDLVAQSLLHPLRIYLRSQSITLPLTYSATLSILLHIPINYFLVNVLQLGIRGIALGSVWTNFNLVVSLIIYIWVSGTHKKTWSGISSACFKGWKSLLNLAIPSCISVCLEWWWYEIMILLCGLLLNPHATVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAENPQKAKLAAIVGLCFSFVLGFSALFFAFSVRNIWATMFTSDPQIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLSFFAGFDFKGLWFGLMAAQGSCMITMLFVLVRTNWENQAERAKELTSSDSSEEEEQEEEKVIVNSSSCGTKECSDSLV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0322 539 MobiDBLite consensus disorder prediction 503 539 - -
Mtr5g0322 539 PANTHER PROTEIN DETOXIFICATION 45 517 - -
Mtr5g0322 539 PANTHER MULTIDRUG RESISTANCE PROTEIN 45 517 - -
Mtr5g0322 539 TIGRFAM matE: MATE efflux family protein 76 473 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr5g0322 539 MobiDBLite consensus disorder prediction 523 539 - -
Mtr5g0322 539 CDD MATE_eukaryotic 66 502 IPR045069 GO:0042910|GO:1990961
Mtr5g0322 539 Pfam MatE 297 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr5g0322 539 Pfam MatE 76 236 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0322 Mtr-Chr5 3005127 3007023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0322 K03327 - gmx:100811560 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0322 5 3005127 3007023 Mtr5g0322 5 3005127 3007023 ECH
Mtr1g3793 1 49490476 49492448 Mtr5g0322 5 3005127 3007023 ECH