Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3793 ATGTGTCATTTAACTTCTCAACCTCCTTCCAAATGCAATTCAAAATCTGAATATCTAGTAGTTTCAATCAAAGACACAAAAGAGTCCAACAACAACAACAACATGATGACCAATCCACTTATCCAAAAAGACATAAACATAGAAAATCCAACAACACAATTCCAAAAAACCCATCTTAGAGCTACCTTCAAAGAAGTTATTTCTATATCCAAAATTGCTTTTCCCATGATTTTCACCGGTCTTTTACTCTATTGTCGTTCAATGATCTCCATGCTCTTTCTTGGTCACCTCGGCGAACTTGCCTTAGCCGGCGGTTCACTCGCGGTCGGCTTTGCGAACATTACCGGTTACTCAATCCTCTCCGGTCTCGCCGTTGGAATGGAACCTATTTGTGGACAAGCTTTTGGTGCAAAAAGATTCACTCTCCTTGGTCTATGTTTACAAAAAACCATTCTCTTGCTACTCTTAACTTCTATCCCTATTTCATTACTTTGGCTTTACACAAAACATATCCTTCTTTTATGTGGCCAAGAAGAAGATATAGCTACACAAGCTCAAATCTATCTTCTATATTCCATTCCTGATCTCTTAGCACAATCGTTTTTACACCCTTTAAGAATTTACCTTAGAAGCCAATCCATTACTCTGCCTCTCACACTTTGTGCTACTTTAGCAATTTTTCTTCACATTCCCATAAACTATTTTCTTGTTTCTCACCTCAATATGGGAATCAAAGGTGTAGCTTTAAGTGGGGTGTGGACAAATTTCAACCTTGTTGCATCTTTGATACTTTACATAGTTTTCTCTGGCACGCACAAGAAAACATGGGGTGGTTTTTCATCACAATGTTTCAAACAATGGAAATCACTTCTTAATTTAGCTGTACCAAGTTGTCTTTCTGTTTGCCTTGAATGGTGGTGGTATGAAATCATGATTTTGTTATGTGGTTTGTTGATAAATCCAAGAGCAACCGTTGCTTCTATGGGAATTTTGATTCAAACTACTTCTTTGCTATATATTTTTCCATCATCAATAAGTTTTAGTGTTTCCACTAGAGTTGGTAACAAACTTGGTGCTCAAAAGCCATCAAAAGCAAAACTTTCAGCAATTGTAGGACTCACTTGTAGCTTCATTTTAGGTGTGTTTGCTTTGGTTTTTGCTGTAATGGTTAGAAACATTTGGGCTAGCATGTTCACTGAAGACAAAGAGATAATAAAAATTACATCTTTAGTGTTACCTTTAATAGGGCTATGTGAACTTGGAAATTGTCCACAAACAACAGGTTGTGGGGTGTTAAGAGGAACAGCAAGGCCTAAAGTAGGTGCAAATATCAATTTTGGTTGTTTTTACATTGTTGGAATGCCAGTGGCAATTTGGTTAGCTTTTTATGTTGGGTTTGATTTTCAAGGTTTGTGGATTGGGTTGCTTGTGGCTCAGGGAACTTGTGCTGTGACTATGTTGGTTGTTTTGAGTCAAACAGATTGGGATTGTGAAGCACTAAGAGCTAAGAAATTAACTGGAATTGGAGAAGCAACAAAAACAAGTGATGTTTTTATTGATGACAGCAAAGAAGTTGATGAAGAGAAGTTACTTAAAGCTGAAATTAAGGAAGATTCTTCTTAA 1623 0.3697 MCHLTSQPPSKCNSKSEYLVVSIKDTKESNNNNNMMTNPLIQKDINIENPTTQFQKTHLRATFKEVISISKIAFPMIFTGLLLYCRSMISMLFLGHLGELALAGGSLAVGFANITGYSILSGLAVGMEPICGQAFGAKRFTLLGLCLQKTILLLLLTSIPISLLWLYTKHILLLCGQEEDIATQAQIYLLYSIPDLLAQSFLHPLRIYLRSQSITLPLTLCATLAIFLHIPINYFLVSHLNMGIKGVALSGVWTNFNLVASLILYIVFSGTHKKTWGGFSSQCFKQWKSLLNLAVPSCLSVCLEWWWYEIMILLCGLLINPRATVASMGILIQTTSLLYIFPSSISFSVSTRVGNKLGAQKPSKAKLSAIVGLTCSFILGVFALVFAVMVRNIWASMFTEDKEIIKITSLVLPLIGLCELGNCPQTTGCGVLRGTARPKVGANINFGCFYIVGMPVAIWLAFYVGFDFQGLWIGLLVAQGTCAVTMLVVLSQTDWDCEALRAKKLTGIGEATKTSDVFIDDSKEVDEEKLLKAEIKEDSS* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3793 540 TIGRFAM matE: MATE efflux family protein 75 472 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g3793 540 PANTHER MULTIDRUG RESISTANCE PROTEIN 45 516 - -
Mtr1g3793 540 PANTHER PROTEIN DETOXIFICATION 45 516 - -
Mtr1g3793 540 Pfam MatE 75 235 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g3793 540 Pfam MatE 296 458 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g3793 540 CDD MATE_eukaryotic 65 499 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3793 Mtr-Chr1 49490476 49492448 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3793 K03327 - gmx:100777255 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3793 1 49490476 49492448 Mtr5g0322 5 3005127 3007023 ECH
Mtr1g3793 1 49490476 49492448 Mtr1g3793 1 49490476 49492448 ECH