Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0241 ATGTTGAAATTGTTTACACTTCGGGGGCTGCCATGGAGCCCTGGTAGTGGTAGTCGGGAAAAGGTTGAACTAACAGCTGCAGAAGTAGAGTCTCTTCGATCAGAACTTGTTGATTTGGAGGAGAAGGAGGCTCAGTTAAAAGCTCAGTTGGAAAATATTGATGAAATTTTACGGTCAGCTCGTCTATCCGGATATTTATACATCCGAACTAGATGGACAGAGCTTCCAGGAGAATCTCCACCTATTGATGATACCAATGTAGATGATTGGCTTCCTCGCTTTGTTGTTCTTCAGGGTGAATGTCTATTCATATATTTGTTGAGTACAGATTTAAGTCCTCACGACTCAACGCTTCTATCTGACATTGTTGAAGTAAACCAATTACCAAGTTTTAAGCGTGAAGATGGTGAGATAAGATACGCCTTTCGTATTTTAACACGACATGGATTACGATATGAATGCTCGAGCAGTTCTAAGATACAGGTGGATTCGTGGTTAACAGCTCTGCAATCTGACTGCAAACTGGAATCTGATGCATCAACTCCCAATGGTTCAATATAG 561 0.4135 MLKLFTLRGLPWSPGSGSREKVELTAAEVESLRSELVDLEEKEAQLKAQLENIDEILRSARLSGYLYIRTRWTELPGESPPIDDTNVDDWLPRFVVLQGECLFIYLLSTDLSPHDSTLLSDIVEVNQLPSFKREDGEIRYAFRILTRHGLRYECSSSSKIQVDSWLTALQSDCKLESDASTPNGSI* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0241 186 SUPERFAMILY PH domain-like 53 171 - -
Mtr5g0241 186 PANTHER OS05G0595500 PROTEIN 1 185 - -
Mtr5g0241 186 Coils Coil 22 59 - -
Mtr5g0241 186 Gene3D - 57 181 IPR011993 -
Mtr5g0241 186 PANTHER OS05G0595500 PROTEIN 1 185 - -
Mtr5g0241 186 SMART PH_update 60 176 IPR001849 -
Mtr5g0241 186 ProSiteProfiles PH domain profile. 59 174 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0241 Mtr-Chr5 2197465 2200693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0241 - - ccaj:109810881 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0241 5 2197465 2200693 Mtr5g0241 5 2197465 2200693 ECH
Mtr5g0241 5 2197465 2200693 Mtr8g3551 8 46084921 46097388 PCT