Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4718 ATGGGCATTTCTGTGAGAGATTTGGACCCAGCTCTCAAGGGAGCCGGACAAAAAGATGGACTTGAAATATGGCGTATTGAGAACTTTAATCCAGTTCCCATCCCTCAGTCTTCTCATGGAAAGTTTTTCACTGGAGACTCGTATGTGATCTTGAAGACAACGGCATCAAAAAGTGGTGCTCTGCGCCATGATATTCATTATTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCCGCAGCCATCAAAACAGTTGAGTTGGATGCAGTTCTAGGAGGACGTGCTGTTCAGTATCGTGAAGTACAGGGTCATGAAACTCAGAAGTTCCTGTCATATTTCAAACCATGTATTATACCACAAGAAGGTGGAGCTGCCTCTGGTTTTAAGCATGTTGAAGCTGAAGAACATAAGACACGGTTGTTTGTCTGCAAAGGGAAACATGTTGTGTATGTCAAAGAGGTTCCTTTTGCTCGATCTTCACTCAACCATGATGATATTTTTATTCTTGATACTGAGTCAAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTTCAATATATTAAGGATACCTACCATGATGGGAAATGTGAAGTGGCTTCTATTGAGGATGGAAGGTTGATGGCTGACTCTGAATCTGGAGAATTCTGGGGTTTGTTTGGTGGCTTTGCTCCTCTTCCGCGTAAAACAGTCAGTGATGATGATAAGACAATTGATTCTCATCCTCCAAAGTTGCTTTGTGTGGAAAAGGGGAAGGCAGAGCCTTTTGAAACCGATTCTTTGACAAAGGAATTACTGGACACCAACAAATGCTATATTTTAGATTGTGGGTTAGAGGTGTTTGTTTGGATAGGACGAAACACATCTCTCGATGAAAGGAAAAGCGCAAGTGGATCTACAGATGAACTAGTCAGTAGCACCAATCGACCAAAATCCCAGATAATCCGCGTAATGGAAGGATTTGAAACAGTGATGTTCAGGTCCAAATTTGATTCTTGGCCTCAGACAACTAATGCAGCAATGCCTGAAGATGGCCGTGGCAAGGTAGCAGCACTTCTTAAACGTCAAGGATTGGATGTCAAGGGCCTCGTGAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCTACATTGACTGCACGGGACATTTACAAGTTTGGCGTGTGAATGGTCAAGAAAAAAATCTTCTCGCAGCCACTGACCAGTCAAAATTTTATAGCGGAGATTGCTACATCTTTCAGTATTCATATCCAGGAGAAGATAGGGAGGAGCATCTTATAGGAACATGGATTGGAAAGAACAGTGTTGAGGATGAAAGAGCCTCATGTCTTTCACTAGCAAGCAAAATGGTCGAATCAATGAAGTTTATTCCATCTATGGCTCGTATTTATGAAGGCAGTGAAACAATTCAATTTTATTCCATCCTCCAAAGCTTGATTGTTTTTAAGGGCGGACTTAGTGATGCATATAAGAATTACATTGCGGAGAATGAAATTCCAGACGAGACATACAAGGAAGATGGTGTTGCATTATTTCGCATCCAGGGCTCTGGACCAGAGAGTATGCAAGCTATACAAGTTAACTCAGCTGCTTCCTCCTTGAATTCCTCTTATTGCTACATACTTCAGAGTGAGTCCGTTGTTTTTACATGGTATGGAAATCTTACAAATTCTGATGACCAAGAACTCGCTGAGAGAATGCTGGATTTAATTAAGCCGGATTTACAATGCAGACCACAAAAGGAAGGTGCAGAAACTGAACAGTTTTGGGAATTGTTAGGAGTGAAAACAGAATATTCCAGTCAAAAGATTGTGAGGGAAGCTGAAAATGATCCTCACCTATTTTCTTGCAATTTCTCAGAAGGAAATTTAAAGGTGATAGAGATACACAACTTTTCCCAGGATGATTTGATGACAGAAGATATCTTCATCTTGGATTGTCACTCTCAAATCTTTGTGTGGGTTGGCCAGCAGGTTGACCCCAAACGTAGAGTGCAGGCTCTCCCAATTGGTGAGAAATTTCTCGAACAAGATTTTCTTCTAGAAACAATATCTTGTTCTGCTCCAATATATATTGTCATGGAAGGCAGCGAGCCGCCTTTCTTCACTCGCTTCTTTAAATGGGATTCTGCAAAATCTGCAATGCTGGGAAACTCATATCAAAGGAAGCTTGCAATCATGAAAAATGGGGGCACTCCACCTTTGGTTAAACCCAAAAGAAGAGCATCTGTATCTTATGGGGGAAGGTCTGGTGGTTTGCCAGAGAAATCCCAGCGCTCTCGCAGTATGTCTGTTAGTCCTGACCGTGTTCGTGTGAGAGGAAGATCTCCGGCCTTCAATGCATTGGCAGCTACTTTCGAGAACTCAAATGTTAGAAACCTTTCAACCCCACCTCCAATGATTAGAAAACTGTACCCAAAATCTAAGACACCAGATTTAGCAACGCTGGCACCTAAATCATCAGCCATATCTCATCTTACTTCTACTTTTGAACCACCATCAGCACGAGAAAAATTGATTCCTCGGTCACTTAAAGATACTTCCAAATCAAACCCTGAGACAAACAGTGACAATGAGAATTCTACGGGCAGCCGAGAAGAATCTCTTACTATACAGGAAGATGTGAACGAGGGTGAACCTGAAGATAATGAAGGTCTTCCAGTTTACCCATATGAAAGTGTTAAAACAGATTCTACAGATCCTATGCCAGACATTGACGTGACTAAACGAGAGGCTTATCTATCACCTGAGGAATTCCAAGAGAGACTGGGAATGACTAGGAGTGAATTTTACAAGTTGCCAAAATGGAAACAGAACAAACTCAAAATGGCTGTTCAGTTGTTCTGA 2877 0.4168 MGISVRDLDPALKGAGQKDGLEIWRIENFNPVPIPQSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAVLGGRAVQYREVQGHETQKFLSYFKPCIIPQEGGAASGFKHVEAEEHKTRLFVCKGKHVVYVKEVPFARSSLNHDDIFILDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVASIEDGRLMADSESGEFWGLFGGFAPLPRKTVSDDDKTIDSHPPKLLCVEKGKAEPFETDSLTKELLDTNKCYILDCGLEVFVWIGRNTSLDERKSASGSTDELVSSTNRPKSQIIRVMEGFETVMFRSKFDSWPQTTNAAMPEDGRGKVAALLKRQGLDVKGLVKADPVKEEPQPYIDCTGHLQVWRVNGQEKNLLAATDQSKFYSGDCYIFQYSYPGEDREEHLIGTWIGKNSVEDERASCLSLASKMVESMKFIPSMARIYEGSETIQFYSILQSLIVFKGGLSDAYKNYIAENEIPDETYKEDGVALFRIQGSGPESMQAIQVNSAASSLNSSYCYILQSESVVFTWYGNLTNSDDQELAERMLDLIKPDLQCRPQKEGAETEQFWELLGVKTEYSSQKIVREAENDPHLFSCNFSEGNLKVIEIHNFSQDDLMTEDIFILDCHSQIFVWVGQQVDPKRRVQALPIGEKFLEQDFLLETISCSAPIYIVMEGSEPPFFTRFFKWDSAKSAMLGNSYQRKLAIMKNGGTPPLVKPKRRASVSYGGRSGGLPEKSQRSRSMSVSPDRVRVRGRSPAFNALAATFENSNVRNLSTPPPMIRKLYPKSKTPDLATLAPKSSAISHLTSTFEPPSAREKLIPRSLKDTSKSNPETNSDNENSTGSREESLTIQEDVNEGEPEDNEGLPVYPYESVKTDSTDPMPDIDVTKREAYLSPEEFQERLGMTRSEFYKLPKWKQNKLKMAVQLF* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4718 958 Pfam Gelsolin repeat 267 337 IPR007123 -
Mtr4g4718 958 Pfam Gelsolin repeat 638 672 IPR007123 -
Mtr4g4718 958 Pfam Gelsolin repeat 151 212 IPR007123 -
Mtr4g4718 958 Pfam Gelsolin repeat 28 111 IPR007123 -
Mtr4g4718 958 Gene3D Severin 133 246 IPR029006 -
Mtr4g4718 958 Gene3D Severin 614 735 IPR029006 -
Mtr4g4718 958 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Mtr4g4718 958 SMART VILL_6 622 719 IPR007122 GO:0051015
Mtr4g4718 958 SMART VILL_6 254 344 IPR007122 GO:0051015
Mtr4g4718 958 SMART VILL_6 137 234 IPR007122 GO:0051015
Mtr4g4718 958 SMART VILL_6 392 489 IPR007122 GO:0051015
Mtr4g4718 958 SMART VILL_6 19 117 IPR007122 GO:0051015
Mtr4g4718 958 SMART VILL_6 519 606 IPR007122 GO:0051015
Mtr4g4718 958 MobiDBLite consensus disorder prediction 835 915 - -
Mtr4g4718 958 SUPERFAMILY VHP, Villin headpiece domain 883 958 IPR036886 GO:0003779|GO:0007010
Mtr4g4718 958 MobiDBLite consensus disorder prediction 741 781 - -
Mtr4g4718 958 Gene3D Severin 7 132 IPR029006 -
Mtr4g4718 958 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Mtr4g4718 958 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Mtr4g4718 958 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Mtr4g4718 958 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Mtr4g4718 958 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Mtr4g4718 958 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Mtr4g4718 958 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Mtr4g4718 958 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Mtr4g4718 958 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 255 427 IPR036180 -
Mtr4g4718 958 Gene3D Severin 388 502 IPR029006 -
Mtr4g4718 958 SUPERFAMILY Actin depolymerizing proteins 129 244 - -
Mtr4g4718 958 Gene3D Severin 517 613 IPR029006 -
Mtr4g4718 958 PANTHER VILLIN 1 958 IPR007122 GO:0051015
Mtr4g4718 958 CDD gelsolin_S3_like 254 343 - -
Mtr4g4718 958 Gene3D Villin headpiece domain 896 958 IPR036886 GO:0003779|GO:0007010
Mtr4g4718 958 ProSiteProfiles Headpiece (HP) domain profile. 893 958 IPR003128 GO:0003779|GO:0007010
Mtr4g4718 958 SUPERFAMILY Actin depolymerizing proteins 10 147 - -
Mtr4g4718 958 CDD gelsolin_S4_like 386 485 - -
Mtr4g4718 958 PANTHER VILLIN-4 1 958 - -
Mtr4g4718 958 Gene3D Severin 247 356 IPR029006 -
Mtr4g4718 958 CDD gelsolin_S1_like 12 124 - -
Mtr4g4718 958 MobiDBLite consensus disorder prediction 855 879 - -
Mtr4g4718 958 Pfam Villin headpiece domain 923 958 IPR003128 GO:0003779|GO:0007010
Mtr4g4718 958 CDD gelsolin_S2_like 138 232 - -
Mtr4g4718 958 SMART VHP_1 923 958 IPR003128 GO:0003779|GO:0007010
Mtr4g4718 958 CDD gelsolin_S6_like 621 720 - -
Mtr4g4718 958 SUPERFAMILY Actin depolymerizing proteins 511 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4718 Mtr-Chr4 61183609 61193798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4718 - - gmx:100807762 1628.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4718 4 61183609 61193798 Mtr4g4718 4 61183609 61193798 ECH
Mtr2g1464 2 16086037 16099670 Mtr4g4718 4 61183609 61193798 PCT