Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1464 ATGGCAGTTTCTATGAGAGATTTGGATCCAGCTTTCCAAGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGTATTGAGAATTTTAATCCAGTACCTGTCCCAAAATCCTCCTATGGCAAATTTTTCACTGGGGATTCCTACGTGATCTTAAAGACAACTGCCTCAAAAAGTGGTGCTCTGCGTCATGACATCCATTACTGGATTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTGGATGCAGCTCTCGGAGGACGTGCTGTTCAGTATCGGGAAGTACAGGGCCATGAAACTGAAAAGTTCCTTTCTTATTTCAAACCTTGTATTATACCTCAAGAAGGTGGAGTTGCTTCTGGTTTTAAACATGCCGAGGCTGAAAAACACAAGACACGGTTGTTTGTATGCAGAGGGAAACATGTTGTACATGTCAAAGAGGTTCCTTTTGCTCGATCTTCACTAAACCATGATGATATTTTTGTTCTTGACACCGAGTCAAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGAGCTAAAGCTTTGGAGGTTGTACAGTATATTAAGGATACCTACCATGAGGGGAAATGCGAGATAGCTGCTATTGAGGATGGAAAGTTAATGGCTGATCCTGAAACTGGGGAATTCTGGGGTTTCTTTGGCGGATTTGCTCCTCTTCCACGAAAAGCAGCCAGTGATAATGATAAGTCTGCTGATTCTCACTCTACAAAACTGCTTAGTGTTGAAAAGGGACAGGCAGAACCTGTTGAGGCCGATTCTTTGAAAAGGGAGTTTCTAGACACAAATAAATGTTATATTCTGGATTGTGGGTTGGAAATATTCGTCTGGATGGGAAGAAACACCTCCCTTGATGAAAGAAAAAGTGCAAGTGGAGTTGCTGATGAGTTAGTCAGTGGCATTGATCAACTTAAACCCCAAATAGTTCGAGTAATTGAAGGATTTGAAACAGTGTTGTTTAAGTCCAAGTTTGATTCTTGGCCTCAGACCCCTGATGTAACTGTATCTGAAGATGGACGTGGCAAGGTAGCAGCACTCCTGAAACGTCAAGGAGTAAATGTCAAGGGTCTGTTGAAAGCTGACGCAGTAAAGGAAGAACCTCAACCTTACATTGATTGCACTGGACATTTACAGGTTTGGCGCGTGAACGGTCAGGAAAAGATTCTTCTCCCAGCTTCTGATCAATCAAAATTTTATAGTGGAGATTGCTTCATCTTTCAATATTCGTATCCTGGAGAAGATAAGGACGACTGTCTCATTGGAACGTGGATAGGAAAGAACAGTGTTGAGGAAGAAAGAGCTTCAGCTAATTCACTGGCTAGCAAAATGGTTGAGTCAATGAAGTTTCTTGCTTCTCAGGCTCGTATATATGAAGGAAATGAACCAATTCAATTCCATTCTATCCTACAAACCTTCATAGTTTTTAAGGGAGGGCTTAGTGATGGATACAAGACTTACATTGCGGAAAAGGAAATTCCTGATGAGACATACAATGAGGACAGCGTTGCATTATTCCGCATCCAGGGCACTGGACCTGATAATATGCAAGCTATACAAGTTGAACCGGTTGCTTCTTCCTTGAATTCCTCTTATTGCTATATACTTCATAATGGACCTGCTATCTTTACTTGGTCTGGAAGCAATACAACTGCAGAAGACCAGGAACTTATAGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCAAAACCACAAAGGGAAGGTACAGAATCTGAACAGTTTTGGGATTTGTTGGGAGGAAAATCAGAATATCCCAGTCAAAAGATTAGTAGAGAGGCTGAAAGTGATCCTCACCTATTTTGTTGCAGTTTCTCAAACGGAAACTTAAAGGTTACGGAGATATACAATTTCTCCCAGGATGATTTAATGACAGAAGACATTTTCATCTTGGATTGTTACTCAGATATCTTTGTCTGGGTTGGCCAGGAGGTTGATTCCAAGAGTAGAATGCAGGCACTCACAATTGGCGAGAAATTTCTTGAGAATGATTTTCTGCTGGAAAAATTATCTCGTGTGGCTACAATATATGTTGTCATGGAAGGGAGTGAGCCACCATTTTTCACTCGTTTTTTTAATTGGGAGTCAGCAAAGTCTGCAATGTTGGGGAACTCATTTCAAAGGAAGCTTAAAATTGTGAAAAATGGGGGGACTGCACCATTGGATAAACCCAAACGGCGAACACCCACGTATGGAGGAAGGTCTAGTAGTGTGCCTGATAAATCGCAGCAACGTTCCTCCCGTAGCATGTCTGTTAGTCCTGATCGTGTTCGGGTGAGGGGAAGGTCTCCGGCCTTTAATGCACTAGCTGCTACTTTCGAGAGCCCCGGCGGTAGGAACCTTTCAACTCCACCTCCAGTAATAAGAAAACTGTATCCGAAATCTACGACTCCAGATTCTGCAATACTAGCATCAAAATCTAAAGCCATAGCTGCACTTACTTCTAGTTTTGAACAACCACCTTCTGCACGAGAAACTATGATACCTCGGTCAGTTAAAGTGAGTCCAGTCACCCCTAAATCAAACCCTGAGAAAAATGACAAGGAGAATTCGGTGAGTGGCAGAGTAGAATCTCTTACCATAGAAGAAGATGTGAAAGAAGGCGAAGCTGAAGATGAGGAAGGTCTCCTGATTTACCCATATGAACGCCTTAAAATAACATCTACAGATCCTGTGCCAGACATTGATGTAACTAAAAGAGAGACTTATCTATCATCTGCGGAGTTCAAAGAGAAATTTGGGATGTCCAAGGATGCTTTTTACAAGTTGCCCAAATGGAAACAAAACAAACTCAAAATGGCTATTCAGTTATTCTGA 2889 0.4178 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWIGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEKHKTRLFVCRGKHVVHVKEVPFARSSLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEIAAIEDGKLMADPETGEFWGFFGGFAPLPRKAASDNDKSADSHSTKLLSVEKGQAEPVEADSLKREFLDTNKCYILDCGLEIFVWMGRNTSLDERKSASGVADELVSGIDQLKPQIVRVIEGFETVLFKSKFDSWPQTPDVTVSEDGRGKVAALLKRQGVNVKGLLKADAVKEEPQPYIDCTGHLQVWRVNGQEKILLPASDQSKFYSGDCFIFQYSYPGEDKDDCLIGTWIGKNSVEEERASANSLASKMVESMKFLASQARIYEGNEPIQFHSILQTFIVFKGGLSDGYKTYIAEKEIPDETYNEDSVALFRIQGTGPDNMQAIQVEPVASSLNSSYCYILHNGPAIFTWSGSNTTAEDQELIERMLDLIKPNLQSKPQREGTESEQFWDLLGGKSEYPSQKISREAESDPHLFCCSFSNGNLKVTEIYNFSQDDLMTEDIFILDCYSDIFVWVGQEVDSKSRMQALTIGEKFLENDFLLEKLSRVATIYVVMEGSEPPFFTRFFNWESAKSAMLGNSFQRKLKIVKNGGTAPLDKPKRRTPTYGGRSSSVPDKSQQRSSRSMSVSPDRVRVRGRSPAFNALAATFESPGGRNLSTPPPVIRKLYPKSTTPDSAILASKSKAIAALTSSFEQPPSARETMIPRSVKVSPVTPKSNPEKNDKENSVSGRVESLTIEEDVKEGEAEDEEGLLIYPYERLKITSTDPVPDIDVTKRETYLSSAEFKEKFGMSKDAFYKLPKWKQNKLKMAIQLF* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1464 962 Gene3D Villin headpiece domain 900 962 IPR036886 GO:0003779|GO:0007010
Mtr2g1464 962 Gene3D Severin 613 733 IPR029006 -
Mtr2g1464 962 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Mtr2g1464 962 MobiDBLite consensus disorder prediction 754 777 - -
Mtr2g1464 962 Gene3D Severin 517 612 IPR029006 -
Mtr2g1464 962 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 253 427 IPR036180 -
Mtr2g1464 962 CDD gelsolin_S5_like 517 608 - -
Mtr2g1464 962 Pfam Gelsolin repeat 638 712 IPR007123 -
Mtr2g1464 962 Pfam Gelsolin repeat 410 479 IPR007123 -
Mtr2g1464 962 Pfam Gelsolin repeat 28 111 IPR007123 -
Mtr2g1464 962 Pfam Gelsolin repeat 150 216 IPR007123 -
Mtr2g1464 962 Pfam Gelsolin repeat 266 334 IPR007123 -
Mtr2g1464 962 CDD gelsolin_S2_like 138 223 - -
Mtr2g1464 962 CDD gelsolin_S3_like 257 343 - -
Mtr2g1464 962 SUPERFAMILY Actin depolymerizing proteins 129 240 - -
Mtr2g1464 962 Gene3D Severin 388 501 IPR029006 -
Mtr2g1464 962 MobiDBLite consensus disorder prediction 242 262 - -
Mtr2g1464 962 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Mtr2g1464 962 Pfam Villin headpiece domain 927 962 IPR003128 GO:0003779|GO:0007010
Mtr2g1464 962 CDD gelsolin_S6_like 621 718 - -
Mtr2g1464 962 PANTHER VILLIN 1 962 IPR007122 GO:0051015
Mtr2g1464 962 SUPERFAMILY VHP, Villin headpiece domain 888 962 IPR036886 GO:0003779|GO:0007010
Mtr2g1464 962 Gene3D Severin 7 132 IPR029006 -
Mtr2g1464 962 MobiDBLite consensus disorder prediction 840 880 - -
Mtr2g1464 962 Gene3D Severin 133 246 IPR029006 -
Mtr2g1464 962 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Mtr2g1464 962 SUPERFAMILY Actin depolymerizing proteins 511 615 - -
Mtr2g1464 962 SMART VILL_6 392 489 IPR007122 GO:0051015
Mtr2g1464 962 SMART VILL_6 137 234 IPR007122 GO:0051015
Mtr2g1464 962 SMART VILL_6 519 606 IPR007122 GO:0051015
Mtr2g1464 962 SMART VILL_6 19 117 IPR007122 GO:0051015
Mtr2g1464 962 SMART VILL_6 254 344 IPR007122 GO:0051015
Mtr2g1464 962 SMART VILL_6 622 719 IPR007122 GO:0051015
Mtr2g1464 962 CDD gelsolin_S4_like 386 485 - -
Mtr2g1464 962 CDD gelsolin_S1_like 12 124 - -
Mtr2g1464 962 ProSiteProfiles Headpiece (HP) domain profile. 897 962 IPR003128 GO:0003779|GO:0007010
Mtr2g1464 962 MobiDBLite consensus disorder prediction 740 784 - -
Mtr2g1464 962 PANTHER VILLIN-3-LIKE 1 962 - -
Mtr2g1464 962 Gene3D Severin 247 354 IPR029006 -
Mtr2g1464 962 SMART VHP_1 927 962 IPR003128 GO:0003779|GO:0007010
Mtr2g1464 962 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Mtr2g1464 962 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Mtr2g1464 962 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Mtr2g1464 962 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Mtr2g1464 962 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Mtr2g1464 962 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Mtr2g1464 962 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Mtr2g1464 962 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1464 Mtr-Chr2 16086037 16099670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1464 - - gmx:100808499 1727.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1464 2 16086037 16099670 Mtr4g4718 4 61183609 61193798 PCT