Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4699 ATGGCCACGGCGGTAGAGCCAATTCCAAACGGCACTCTTCAATCAGAATCATATACAATCTTTGACGCCGCCGCGAATCCTACGGATGAATCTGAATCCGAGAAGAGATGGCCAGGTTGGCCTGGTCACTGTGTTTTCCGGCTAATTGTTCCCGTTGTTAAAGTTGGCATCATCATAGGCCGTAAAGGGGAATTGATCAAAAAGACTTGCGAAGAGACTCATGCTCGCATTCGTGTTCTTGATGCTCCAGTTGGTACTCCTGATCGAATTGTGCTTATATCTGGAAAAGAGGATTTGGAGGCACCGCTCTCTCCTGCAATGGATGCTATTCTTAGGATTTTTAAACGTGTATCCGGATTATCTGAAACTGATAACAATAATACAGCAGCCGCAGGGGTTGCATTATGTTCCATCCGTTTATTGGTGGCGTCAACGCAGGCTATCAATTTGATAGGAAAACAAGGCTCTTCAATTAAAGCTATACAGGAAAATACGGGTGCTGTTATTAGAGTTTTGTCGGGAGATGAACTTCCATCTTATGCTGGTGCCGATGAAAGGATTATTGATTTGCAGGGAGAAACCTTGAAGGTCCTTAAAGCTTTGGAAGCCGTAGTCGGGCACCTGAGAAAGTTTCTGGTTGATAGTAGCGTTATTCCCCTATTTGAGAAAACTTGCAATGCAACAATTTCCCAAGACCGCCAGACAGATGCCTGGGCTGACAAACCATCACTGTATAGTGCTTCACAACCTAGCATTGTTGCTGACATTCCCACAAAGAGGGATTCTTTCTTTGCTGACCGTGAAAGTCAATTGGATTCATTGCTTTCTTCCTCGACAATGTCGTTGTATGGACAAGATTCTTCTTCTATTTCTGGTCTTCGTTCTTCGGCGTTTAATCGTGCCAGTGCTTCCATTGTTACTACAGTGATACAAACAATGCAAATACCATTGTCCTATGCAGAGGACATAATTGGTATTCAAGGGACTAATATTGACTACATTCGTCGCACCAGTGGAGCTATATTGACTGTGCAGGAGAGCAGGGTGCCTGATGAAATCATTGTGGAAATAAAAGGCACCTCCACTCAAGTTCAAACAGCACAACAATTGATTCAGGAAGTTATAACCAATCACAATGAAACTATTGCCAGTAATTATGCTAGGTTAGATACAGGGCTGAGGTCTTCTTACTCTCAATTGGGTAGTTCATCCTATCCATCATCTTCTTTGCCATCACAACCCTACAATGGGTATGGATCTTCTGGTCCAGGGGATTATAGTACTTTCAGACTTTAA 1296 0.4329 MATAVEPIPNGTLQSESYTIFDAAANPTDESESEKRWPGWPGHCVFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSPAMDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLRKFLVDSSVIPLFEKTCNATISQDRQTDAWADKPSLYSASQPSIVADIPTKRDSFFADRESQLDSLLSSSTMSLYGQDSSSISGLRSSAFNRASASIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRVPDEIIVEIKGTSTQVQTAQQLIQEVITNHNETIASNYARLDTGLRSSYSQLGSSSYPSSSLPSQPYNGYGSSGPGDYSTFRL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4699 431 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER 31 419 - -
Mtr4g4699 431 ProSiteProfiles Type-1 KH domain profile. 135 204 - -
Mtr4g4699 431 CDD PCBP_like_KH 137 205 - -
Mtr4g4699 431 ProSiteProfiles Type-1 KH domain profile. 308 371 - -
Mtr4g4699 431 MobiDBLite consensus disorder prediction 400 423 - -
Mtr4g4699 431 Gene3D K Homology domain, type 1 135 211 IPR036612 GO:0003723
Mtr4g4699 431 Gene3D K Homology domain, type 1 44 118 IPR036612 GO:0003723
Mtr4g4699 431 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 303 377 IPR036612 GO:0003723
Mtr4g4699 431 MobiDBLite consensus disorder prediction 400 431 - -
Mtr4g4699 431 Gene3D K Homology domain, type 1 306 382 IPR036612 GO:0003723
Mtr4g4699 431 CDD KH-I 310 372 - -
Mtr4g4699 431 CDD PCBP_like_KH 45 114 - -
Mtr4g4699 431 Pfam KH domain 46 98 IPR004088 GO:0003723
Mtr4g4699 431 Pfam KH domain 311 373 IPR004088 GO:0003723
Mtr4g4699 431 Pfam KH domain 138 204 IPR004088 GO:0003723
Mtr4g4699 431 SMART kh_6 42 115 IPR004087 GO:0003676
Mtr4g4699 431 SMART kh_6 134 209 IPR004087 GO:0003676
Mtr4g4699 431 SMART kh_6 307 376 IPR004087 GO:0003676
Mtr4g4699 431 ProSiteProfiles Type-1 KH domain profile. 43 110 - -
Mtr4g4699 431 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 31 419 - -
Mtr4g4699 431 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 37 98 IPR036612 GO:0003723
Mtr4g4699 431 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 126 219 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4699 Mtr-Chr4 61002952 61008205 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4699 K21444 - gmx:100802089 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4699 4 61002952 61008205 Mtr4g4699 4 61002952 61008205 ECH
Mtr4g4699 4 61002952 61008205 Mtr2g1506 2 16639658 16646804 PCT