Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1506 ATGGCCACCACCGAACAACCCCAAAACGGCACCGCCACACTCCCACCGGAAAATCCCTCCGCCGACGCACAACAACTCACCATCGACACCGAAGCAACCACCAACGAATCCACTCAGGAAATCGAGACGGTAACCGAAACCGGAACAGACACCGCGGCCACCGCCGTTACTCCTCCGGAGCAGAGATGGCCGGGTTGGCCTGGAGACTGCGTGTTCCGTTTGATAGTTCCTGTTGGGAAAGTCGGTGGAATCATTGGTCGTAAAGGAGACCTCATCAAGAAGCTTTGTGATGAAACGAAAGCTCGTGTTCGTGTTCTTGATGCCGATCTTGGTATTCCTGATCGAATTATACTTATATCAGGGAAGGAAGAACTTGAAGCAGCTATTTCCCCTGCAATGGATGCTGTTATAAGGATATTCAAACGCGTCTCTGGATTGTCTGAGACTGACAGTGAGAATAAAGGACCTGCTGGGGTTACACTTTGCTCCATCCGATTACTGGTGGCATCAACACAGGCTATCAGTTTGATCGGAAAGCAAGGAACAATAATCAGATCCATACAAGAGAGTTCTGGTGCTTCTGTTAGAGTACTGTCAGGAGATGAAGTGCAATATTTTGCTACTGCGGAAGAGAGGATTGTAGACCTGCAGGGAGAAGCCTTGATGGTTCTTAAAGCTCTGGAAGCCGTGATTGGCCATCTGAGGAAGTTTTTGGTTGATCACAGCATTCTTCCCGTATATGAGAAAACTTACAATGCATCTCTCCCACAACAAGACCGTCAAGCAGAGACCTGGTCTGACAAGCCATTGCTGCATACCACTTCACAGACTAGCATGTTTTCTGATATTCCTTTTCCAACAAAAAGGGATTCTGTCTTTGCTGACCGTGAAAGTCATTTGGACTCATTGCTCTCATCCTCCACTATGTCTCTCTATGGGCAAGATTCTTCTCTTTCTGGTGTTCGTTCTTCATCTCTTAGTCGTGTTGGTGCTCCTATTGTTACTACAGTGATACAAACCATGCAAATACCGCTATCCTATGCGGAGGACATCATTGGCATTCAAGGGACTAATATAGATTATATTCGCCGCACTAGTGGAGCCATATTGACTGTGCAGGAGAGCAGGGTGCCTGATGAAATCGTTGTGGAAATAAAAGGAACCACATCCCAGGTTCAAACAGCACAGCAACTGATACAGGAAGTTATAAGCAGTCACAGAGAACCTGTCACCAACAGCTATGGAAGGTTGGATGCAGGAAGAATGGATGTGGGTCTAAGGTCTTTATATTCTCAGTCTTCATACTCTCAGTTGGGCAATACATCACGTATCCCGCCTTCTTCATTGTCATCACAACCATACACAGGTTATGGAGCATCTGGTTTAGGAGACTATAGTACTTTCAGGCTTTAG 1413 0.4657 MATTEQPQNGTATLPPENPSADAQQLTIDTEATTNESTQEIETVTETGTDTAATAVTPPEQRWPGWPGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISPAMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVDHSILPVYEKTYNASLPQQDRQAETWSDKPLLHTTSQTSMFSDIPFPTKRDSVFADRESHLDSLLSSSTMSLYGQDSSLSGVRSSSLSRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRVPDEIVVEIKGTTSQVQTAQQLIQEVISSHREPVTNSYGRLDAGRMDVGLRSLYSQSSYSQLGNTSRIPPSSLSSQPYTGYGASGLGDYSTFRL* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1506 470 MobiDBLite consensus disorder prediction 1 40 - -
Mtr2g1506 470 Gene3D K Homology domain, type 1 334 408 IPR036612 GO:0003723
Mtr2g1506 470 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 61 129 IPR036612 GO:0003723
Mtr2g1506 470 ProSiteProfiles Type-1 KH domain profile. 161 230 - -
Mtr2g1506 470 ProSiteProfiles Type-1 KH domain profile. 336 399 - -
Mtr2g1506 470 ProSiteProfiles Type-1 KH domain profile. 69 136 - -
Mtr2g1506 470 CDD PCBP_like_KH 71 140 - -
Mtr2g1506 470 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 159 243 IPR036612 GO:0003723
Mtr2g1506 470 MobiDBLite consensus disorder prediction 436 456 - -
Mtr2g1506 470 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER 58 431 - -
Mtr2g1506 470 Pfam KH domain 72 129 IPR004088 GO:0003723
Mtr2g1506 470 Pfam KH domain 339 401 IPR004088 GO:0003723
Mtr2g1506 470 Pfam KH domain 164 230 IPR004088 GO:0003723
Mtr2g1506 470 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 58 431 - -
Mtr2g1506 470 CDD KH-I 338 400 - -
Mtr2g1506 470 SMART kh_6 68 141 IPR004087 GO:0003676
Mtr2g1506 470 SMART kh_6 335 404 IPR004087 GO:0003676
Mtr2g1506 470 SMART kh_6 160 235 IPR004087 GO:0003676
Mtr2g1506 470 CDD PCBP_like_KH 163 231 - -
Mtr2g1506 470 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 332 405 IPR036612 GO:0003723
Mtr2g1506 470 Gene3D - 69 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1506 Mtr-Chr2 16639658 16646804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1506 K21444 - gmx:100815466 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4699 4 61002952 61008205 Mtr2g1506 2 16639658 16646804 PCT