Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4693 ATGCGCTCAGGAGGTTGTGCATTGCAGCAGACCCTCACAGCAGAGGCTGCTTCAGTTTTGAAGCATTCTCTTGTGTTGGCTAGAAGGCGAGGTCATCCACAAGTCACTCCTCTACATGTAGCCATCACTTTACTTACCTTAAGACTAAGTTCCTTCAAAAGGGCTTGTCTTAAGTCTCATCAGCCTCACCATCAAACTTCACAACATCCACTTCAATCTAGGGCTCTTGAGCTTTGTTTCAATGTAGCTCTTAATAGGTTACCAACAACACCTTCTCCTTTGATTCACTCTCAGCCTTCACTTTCCAATGCTCTTATTGCTGCATTGAAAAGAGCACAAGCTCATCAAAGACGAGGTTCCATAGAACAGCAGCAGCAACACCAGCAAACTGTTCTTACTGTCAAAGTTGAGCTTGAACAGCTTATTATATCTATACTTGATGATCCTAGTGTTAGTAGGGTTATGAGAGAAGCTGGATTCTCTAGTACTCTTGTTAAGAACAATTTAGAAGACTCTTTCTCACCTTCTAATTCTGTTTTTAAATGTTATAATAGTTCTGGTGGTGGTGTGTTTTCATCTCCATGTTCGCCTTCAACTAGTGAGAATCATAGAGAAAACATTAACCTTAGCAGTTTCAGACAGAACAATTTCATGGCTGCTACTAGTGCTAAGCACAGTTCTTCTGAGTTTAACTCAGTTCTCTTTTCTCCACCAAAAAGAACCGAGTTGATGAGTACATCAGGTGGACTTGGCTTGACCCTTCATTCTTCCAGTGTCCTTGATTCCAAGATGAGCATCTCTCAGAACTTATCTCATATGCTGGAAACAAAACCCTTTAGCAGTAATAAGGTGCATGAGGATAAACTTAATTGTTGTGAAGAATGTGCTTCCAATTATGAAAAAGAAGCTCAATTTCTCAGACCTGCAGGACAGAAGAAAACTTTGCCTTTCTGGCTTCAGTCTCATGGCACAGAAGAACAAAATAAGGATGCATTAACCGAGTTGAAAAGAAAATGGAATAGACTATGCCACTGTCTACACCAAAACAAACAGCACCAAAACCACTGGAATAGGAGCAACAATAATCACAGTTCAAACCTCAATAATTCATCAAGCATCATATCTCACACCTCCAATCTTACACCTCGATTCCGTCGCCAACAATCATGCAGCACCATTGAGTTCAATTTCAATGATAAAAGGGAAACAACAAAGCCGGTCTTTGATTCCATTGCAAGCATGGAAGGTAAAGAAGTAAAGATTAGTCTTGCACTTGGCAATGATGATTCAAGTGAAAAGGTGGGAAATATAACCGATACAGCGCTACAACAAGCTCATGTTTGTAAACTATTGCAGGAGAATGTGCCATGGCAATCTGAAACTATTCCTTCAATATCAAAAGCCTTGTTTGATACCAAATCAACAAAACTAAATGAGATTTCATTTAGATGGTTATTTTTACAAGGCAATGATTTCATAAGCAAAAGAAGATTAGCACTTGGTATTGCAGAATCAGTTTTTGGTTCAGCTGATTTGGTCCTTCAATTGGATATGCTAAAAAAGGAAACTTTGATAGCCCCATTTTCTGAAATGCTATTAGGAGCATTGAGAAAACATCAACAGCTTGTGGTTTTGATTGAAAATGTTGATTCTGCTGATACCCAATTCATGAAATTTCTCTCGGATGGATATGAAAAAGGAAAGTTTGAAACTTTAAGTAACAAAGAGGGGAATTTAGGTCAAGTAATATTCATCTTAACAAAAGGTGGATCCAAAAGCATTGAAGAGAAGAACCAAAAAACTGTTATCAATTTGTTGTGGCAAATCAGTGAAACTAAGCCTAATTTCTTGAGCCCCAAGAGAAAAGCTGAATTTGATTTGTTTTCCAAAATCAAGAACCCTAGAATTGAAGAGAATGAAAAGGGGTTGTTGATTTCTGAACAAGGAAGCAAAAAGGAAGAATTTTTAAGACAATCAAGCTTTAACAGTAACACCCTTGATCTGAACATGAAAGCTGATGAAGAGGAAGATGGTGAAAATAAAGCAATTGAAAGTAGCTCAATTTCAAGTGATAATCCATTGAACTCAAATGTGTTTCTTGATTCAATTGAGAACAAGTTTGAGTTTAACACAAGTTCAGATAAAGACAGGGAAAAGACAGAGTTTTTTCTGTTTAAGATTAAAGGGTCATTTGAAGATGTTTGTGGTAAGAAAAATGTGGTGAATTTTAGTGTAGATGAAAAAGTGATTGAAGACATGTGTATGGGGTGTTGTTTTTTTACTAACAAAATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTAGAAACAGTTAACTTGGGTGGGAAGGAAGGTATACATTTTAGACTTTGTTTGGGTGATAATAGAAATTGGGATAGTGGGTTTATGGATTCTTCACTGCCTAAGAGTATCCAAGTTAATTACTTCATAGAATGA 2463 0.3719 MRSGGCALQQTLTAEAASVLKHSLVLARRRGHPQVTPLHVAITLLTLRLSSFKRACLKSHQPHHQTSQHPLQSRALELCFNVALNRLPTTPSPLIHSQPSLSNALIAALKRAQAHQRRGSIEQQQQHQQTVLTVKVELEQLIISILDDPSVSRVMREAGFSSTLVKNNLEDSFSPSNSVFKCYNSSGGGVFSSPCSPSTSENHRENINLSSFRQNNFMAATSAKHSSSEFNSVLFSPPKRTELMSTSGGLGLTLHSSSVLDSKMSISQNLSHMLETKPFSSNKVHEDKLNCCEECASNYEKEAQFLRPAGQKKTLPFWLQSHGTEEQNKDALTELKRKWNRLCHCLHQNKQHQNHWNRSNNNHSSNLNNSSSIISHTSNLTPRFRRQQSCSTIEFNFNDKRETTKPVFDSIASMEGKEVKISLALGNDDSSEKVGNITDTALQQAHVCKLLQENVPWQSETIPSISKALFDTKSTKLNEISFRWLFLQGNDFISKRRLALGIAESVFGSADLVLQLDMLKKETLIAPFSEMLLGALRKHQQLVVLIENVDSADTQFMKFLSDGYEKGKFETLSNKEGNLGQVIFILTKGGSKSIEEKNQKTVINLLWQISETKPNFLSPKRKAEFDLFSKIKNPRIEENEKGLLISEQGSKKEEFLRQSSFNSNTLDLNMKADEEEDGENKAIESSSISSDNPLNSNVFLDSIENKFEFNTSSDKDREKTEFFLFKIKGSFEDVCGKKNVVNFSVDEKVIEDMCMGCCFFTNKMFEKWLKDIFQSSLETVNLGGKEGIHFRLCLGDNRNWDSGFMDSSLPKSIQVNYFIE* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4693 820 ProSiteProfiles Clp repeat (R) domain profile. 8 176 IPR004176 -
Mtr4g4693 820 SUPERFAMILY Double Clp-N motif 12 169 IPR036628 -
Mtr4g4693 820 Gene3D - 427 654 IPR027417 -
Mtr4g4693 820 MobiDBLite consensus disorder prediction 353 374 - -
Mtr4g4693 820 Gene3D - 9 173 IPR036628 -
Mtr4g4693 820 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 247 796 - -
Mtr4g4693 820 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 204 - -
Mtr4g4693 820 PANTHER PROTEIN SMAX1-LIKE 5 247 796 - -
Mtr4g4693 820 PANTHER PROTEIN SMAX1-LIKE 5 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4693 Mtr-Chr4 60947743 60951286 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4693 - - aprc:113853131 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4693 4 60947743 60951286 Mtr4g4693 4 60947743 60951286 ECH
Mtr4g4693 4 60947743 60951286 Mtr2g1511 2 16741150 16745945 PCT