Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1511 ATGCGCTCAGGAGCTTATACATTGCAAGAGACACTAACAGCCGAGGCTGCTTCAATCTTGAAGCACTCTCTAGGCTTAGCACGTAGAAGAGGCCATGCACAAATCACACCTCTTCACGTTGCTGCTACACTTTTGAGTTTACCATCTTCTTCTTTAAGAAATGCATGTCTCAAATCTCAACAACAAAATAATCATCCTCTTCAATGTAGAGCTCTTGAACTTTGCTTCAATGTTGCTCTTAATAGACTTCCAACTACTACTACTTCACCTTTGCTTCAACCACAGCATGTTCCTTCACTTTCTAATGCACTCATTGCTGCTCTTAAAAGAGCTCAAGCTCATCAAAGAAGGGGGTGTATTGAGCAAAACCAACAGCAGCAGCAGCAACCACTTTTGAGTGTTAAAGTTGAACTTGATCAGCTTATTCTTTCCATTCTTGATGACCCTTCTGTTAGTAGAGTTATGAGAGAAGCTGGTTTTTCTAGTCCTTCTGTTAAAAACAATTTGGAAAACTCTTCAACTTTAATCAACTCTTCTAGTGTTTTTCATTCTTCACCTTCTCCTCTTAGTCATAACCATTTTCTGAGTTCTTATGGTTATGGTTCTGTTCTCTTTTCTTCACAGAAGAAAGAACAAGTAGTATATCATCCTTTCTTAAAATCTTCTGAGTCTAATAAGGAAGATATTAATCTTGTTTTTGATGTTCTTTTAAGGAAGAAGAAGAAAAACACTGTGATAGTTGGTGATACAGTTTCTTTAACTGAAGGACTAGTTAGTGAGATAATGAAAAGATTTGAAAGAGGTGAAGTACCTGATGAGATGAAAACAACTCATTTTGTGAAGTTTCATGGACTTAGTTCAGTTTCATTGAAGTATATGAAAAAGGAAGAAGTTGAAATGAATGTTATTAGAGTGTTGAAAAGGAAGGTTAGTGATTATGTTGCATTAGGTGTTGGAGCTATTTTTTATGTTGGAGATTTGAAGTGGATAGTGGATGATAATGATGGAAGTTTGAATGAAAAAGAAGTTGTTGATTATGTTGTGGAAGAAATAGGAAAGTTGTTTGGTGAAGAAGGGAACAAGAATGGTAAGATTTGGCTTGTTGCAACAGCTAGTTATCAAAGTTACATGAGGTGTCAAATGAGAGTACCAACTTTTGAGAATCAATGGTGTCTTCAAGCTGTTCCTGTTCCATCTGGTGGACTTGGTTTGAGTCTTCATTCATCAAGTGTGCATGATTCAAAAATGAGCATCTCTCAAAATCCATCTCCTATGCTGGAATCAAAGTTTTTCAGTAACAAGGAGGAACATGAGAAGCTTAATTGTTGTGAAGAGTGTGTCTCCAATTATGAAAAAGAAGCTCAATTGTTCAAACCAGACCAGAAGAATCTGTTGCCTTCATGGCTTCAGTCTCATAGCACAGAAGCACGTCAGAAGGATGAATTAACCCAGTTGAACAAAAAGTGGAACAGATTATGCCAATGTCTCCACCAGAACAAACAACCTCAAAACCATTGGAGCAACAATCACAGTTCAAATGCAAAGATCTACCCTTATAATTCATCATACCCTTATTGGCCAAACCAAGGTAGTAGTATCTTGCCAGATACATCAAGTTCAATATCTTTTGCTGATTCTGCAACCAAACCAGCTTATAGTTCAAACCTTATACCTCGATTCCGGCGCGGACAACAATCATGCACCATTGAGTTCAACTTCAATGATGAAAAAGCTCAGAAAAACCAAGTAACAGCAACCTTGGAATTGGATTCTCTTAAGGGTATGGAAGGTACTAAAGAAGTAAAGACAACTCTTGCACTTGGAAATTCAACATTCAGTGTCTCAGATCAGAAAAGGATGGAAAATTTAACACTGCAAAGAGATCATATATATAAAGTGTTGCAGGAGAATATTCCATGGCATTGTGAAACAGTTAGTTCAATAGCAGAAGCTTTGGTTGATTCTAAATCATCAAAGGAATGTGCTACTTGGTTGTTTTTGCAAGGGAATGATTCTGTTGGGAAAAAAAGGTTGGCACTTGCAATAGCAGAATCAGTGTTTGGATCAGTTGAAATGTTTTCTCATGTGGATATGATGAAGAGAGAGAATTCAGAGACACCCTTTTCTGAAAAGGTTGTTGGGCCATTGAAAAACAATGAAAAGTTTGTTGTTTTGGTTGAAAATGCCGATTTTGGTGATACCCTGATAAGGAAAATGCTTGCTGATGAATTTGAGATTGCAAAGTTTGGAACTTTAGGCCAAAAAATATTCATATTATCCAACGGTGGCAGTATGGTTAGTGAAGATCAGAAGAAGGATTCAGTGATGAAGTTGGTTTTGAAGATTAGTGAAACTGAGAAAAAACCAACTTTTGAGTTATCACCATCTTCATCATCATCATCAAAATCACCTTGTTTAGGTAATAAAAGAAGTGCTGAACTTGACTTGTTTAGCAAGATAAAAATTCCAAGAATTGAAGAAAATGAAGGGAACAAGAAGAGAGAATTTTCATTTTCAAGACAATCAAGCTTCAACAACACTCTTGACTTGAACATGAAAGCTGATGAAGAAGATAATGAAGACTATGATGAGGGAGAAAATAGTCCAATTTCAAGTGATTTGACAAGAGAAACATTAGGAGAACATTTGATCTCAAATGAGTCACTAGACTCAATTGAGAATTTGTTTGAGTTCAATCAAAGTCCAGCTAAGAACAAGGAAATGACACAGATGTTTATGTCAAGGGTAAAAGAGTCATTTGAGGAGGTTTTGGGGAATGTAAAATTTAGTGTACAAGATAAGGTGATAGAGGAAATTGGTGTAGGGTGTGGTTCTTTTACTAACAACATGTTTGAGAAATGGCTAAAAGGCATTTTTCAAACAAGTTTAGAGAGGGTTAATGGTGGGGATAAAAATGGTATAGTTTATACACTTTGTTGGGGTGGTAAAGAGGATAGAAAATGGGATAGTGGGTTTATGGGTTCATGTTTGCCTAAAAATATCCAAATTGTTAACTACTTAATGGATTGA 3030 0.363 MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLPSSSLRNACLKSQQQNNHPLQCRALELCFNVALNRLPTTTTSPLLQPQHVPSLSNALIAALKRAQAHQRRGCIEQNQQQQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFSSPSVKNNLENSSTLINSSSVFHSSPSPLSHNHFLSSYGYGSVLFSSQKKEQVVYHPFLKSSESNKEDINLVFDVLLRKKKKNTVIVGDTVSLTEGLVSEIMKRFERGEVPDEMKTTHFVKFHGLSSVSLKYMKKEEVEMNVIRVLKRKVSDYVALGVGAIFYVGDLKWIVDDNDGSLNEKEVVDYVVEEIGKLFGEEGNKNGKIWLVATASYQSYMRCQMRVPTFENQWCLQAVPVPSGGLGLSLHSSSVHDSKMSISQNPSPMLESKFFSNKEEHEKLNCCEECVSNYEKEAQLFKPDQKNLLPSWLQSHSTEARQKDELTQLNKKWNRLCQCLHQNKQPQNHWSNNHSSNAKIYPYNSSYPYWPNQGSSILPDTSSSISFADSATKPAYSSNLIPRFRRGQQSCTIEFNFNDEKAQKNQVTATLELDSLKGMEGTKEVKTTLALGNSTFSVSDQKRMENLTLQRDHIYKVLQENIPWHCETVSSIAEALVDSKSSKECATWLFLQGNDSVGKKRLALAIAESVFGSVEMFSHVDMMKRENSETPFSEKVVGPLKNNEKFVVLVENADFGDTLIRKMLADEFEIAKFGTLGQKIFILSNGGSMVSEDQKKDSVMKLVLKISETEKKPTFELSPSSSSSSKSPCLGNKRSAELDLFSKIKIPRIEENEGNKKREFSFSRQSSFNNTLDLNMKADEEDNEDYDEGENSPISSDLTRETLGEHLISNESLDSIENLFEFNQSPAKNKEMTQMFMSRVKESFEEVLGNVKFSVQDKVIEEIGVGCGSFTNNMFEKWLKGIFQTSLERVNGGDKNGIVYTLCWGGKEDRKWDSGFMGSCLPKNIQIVNYLMD* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1511 1009 Pfam Clp amino terminal domain, pathogenicity island component 26 53 IPR004176 -
Mtr2g1511 1009 Pfam Clp amino terminal domain, pathogenicity island component 136 171 IPR004176 -
Mtr2g1511 1009 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 983 - -
Mtr2g1511 1009 SUPERFAMILY Double Clp-N motif 10 167 IPR036628 -
Mtr2g1511 1009 Gene3D - 9 173 IPR036628 -
Mtr2g1511 1009 Gene3D - 600 740 IPR027417 -
Mtr2g1511 1009 PANTHER PROTEIN SMAX1-LIKE 5 1 983 - -
Mtr2g1511 1009 Gene3D - 216 399 IPR027417 -
Mtr2g1511 1009 ProSiteProfiles Clp repeat (R) domain profile. 8 175 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1511 Mtr-Chr2 16741150 16745945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1511 - - cam:101489668 1283.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4693 4 60947743 60951286 Mtr2g1511 2 16741150 16745945 PCT