Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4661 ATGTCAAGGTATTTTCAACTTTCGAAAGCTTTGGTTATTCTACTATGTCTTAATATTGTAGTGCACACAAAACAAGCACAACTACAACCATGGTCACCCTTAGATGCACCAAAAGAAATCCTCCAAATGCTTAGTCGTGACCCCGTGACCATTTCACTAGCCTCAACCGATTTTGGCCACATAATTCACCAAAACCCTTTTGCAATTTTTGCACCATCTTCTATTAATGACATATCTAAATTGATCAAATTCTCAAATTCACTTCCTATCCCTTTTACTATAGCAGCAAGAGGGCAAGGACATTCGGTTAATGGACAATCCATGACAAATGATGGGATTGTGGTGAACATGACTGAATTGAATAATGAGCTTAGAAATAATGGGAATGGAATTGTTGTGTTTGATAAATATGTAGATGTTGGTGGTGGACAACGTTGGATTGATGTGTTGCATGCAAGCCTTGAAAAAGGACTTACACCACTTTCTTGGACTGATTATTTGTATTTATCGGTTGGTGGAACTCTCTCTAATGCTGGTATTAGTGGACAAACCTTCCGATTTGGTCCTCAAATTTCCAATGTTCATGAATTGGATGTTGTTACTGGGAAAGGAGACTTGGTGACTTGTTCTACGGAGAAGAACTCAGAATTATTTTATGCGGTTCTTGGAGGTCTAGGCCAATTTGGGATTATAACCCGAGCAAGAATAGCTCTTGGACCTGCACCCAAGAGGGTAAAGTGGCTCCGTTTACTTTACAACGACTTCTCTGCATTTTCTGGAGACCAAGAACATTTAATCTCATTGAATGGAATAGATGAAACTAATGCACCCAATTATGTAGAAGGTTTTTTGCTTCTAAATCAGCCACCACTAGACCTATCCTTTTTTCCAGAAATTGATCAACCTCGCATAACTTCCTTGGTAACTCAATATGGCATAATCTACATCGTTGAGCTTGCCAAATATTACGACGAAAACTCTCAAGATCATGTTGATCAGGAAATTGAAATTTTGCTTCAGGGATTAAAGTTCGTCCCTACTTTTAAATTCGAAAAAGACGTTTCGTACGAAGAATTTCTAGACAGAGTTCACACTGATGAGTTAACACTAAGGGCACAAGGGCTTTGGAATATCCCACATCCTTGGTTAGACCTATTTGTTCCAGGATCTAGAATGTCTGAATTTAATGAAGGTGTGTTGAAGGGTATTATCCTTAAACAAAACATTACCGCAGGACTTGTAATAGTGTACCCAATGAACCGAACAAAGTGGGATGATAAGATGTCAGCTGTTACACCCAATGAAGAAATTTTCTACGTTGTGGACTTTTTGCGTGCAACTGGGTTTGATAATTTGGAGGCATATAAGTCTCAAAACCAACAAATATTGCAATTCTGTAAGGATGTTGGTATAGAAATCAAACATTATCTTCCCCTAAACAGAACACATGAAGAATGGGTGGAACAATATGGCCTCAAATGGAATGCTTTTGAGAAAAGAAAAAATCAATTTGATCCAAATAAAATATTGTCACCTGGGCAAGGGATTTTCAACTAA 1557 0.3802 MSRYFQLSKALVILLCLNIVVHTKQAQLQPWSPLDAPKEILQMLSRDPVTISLASTDFGHIIHQNPFAIFAPSSINDISKLIKFSNSLPIPFTIAARGQGHSVNGQSMTNDGIVVNMTELNNELRNNGNGIVVFDKYVDVGGGQRWIDVLHASLEKGLTPLSWTDYLYLSVGGTLSNAGISGQTFRFGPQISNVHELDVVTGKGDLVTCSTEKNSELFYAVLGGLGQFGIITRARIALGPAPKRVKWLRLLYNDFSAFSGDQEHLISLNGIDETNAPNYVEGFLLLNQPPLDLSFFPEIDQPRITSLVTQYGIIYIVELAKYYDENSQDHVDQEIEILLQGLKFVPTFKFEKDVSYEEFLDRVHTDELTLRAQGLWNIPHPWLDLFVPGSRMSEFNEGVLKGIILKQNITAGLVIVYPMNRTKWDDKMSAVTPNEEIFYVVDFLRATGFDNLEAYKSQNQQILQFCKDVGIEIKHYLPLNRTHEEWVEQYGLKWNAFEKRKNQFDPNKILSPGQGIFN* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4661 518 Gene3D - 48 517 IPR016167 -
Mtr4g4661 518 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 240 IPR036318 GO:0050660
Mtr4g4661 518 Gene3D - 117 243 IPR016169 -
Mtr4g4661 518 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 242 517 IPR015345 GO:0009690|GO:0019139|GO:0050660
Mtr4g4661 518 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 66 101 IPR006093 GO:0016491
Mtr4g4661 518 SUPERFAMILY FAD-linked oxidases, C-terminal domain 242 518 IPR016164 GO:0003824|GO:0050660
Mtr4g4661 518 Pfam FAD binding domain 68 210 IPR006094 GO:0050660
Mtr4g4661 518 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 8 518 - -
Mtr4g4661 518 PANTHER GULONOLACTONE OXIDASE 8 518 - -
Mtr4g4661 518 ProSiteProfiles PCMH-type FAD-binding domain profile. 62 241 IPR016166 GO:0071949
Mtr4g4661 518 Gene3D - 244 476 IPR016170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4661 Mtr-Chr4 60593740 60598620 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4661 K00279 - gmx:100808553 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4661 4 60593740 60598620 Mtr2g1550 2 17276673 17280342 PCT