Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1550 ATGAATGCTATGATTTCAACTCTCGTAGGTTTGCTATGGCTATCCATCATAGTATTCATCACACATGGAAAACCACTCAACTTGCGAGAAATCCCAATTCCCAAAGATCTAGCCCTAAAGCTTAGTCGTAACCCACAAATTCTTTCTCAAGCCTCAACCGATTATGGCCACATTATTCATGAAAATCCCTTTGCAGTTTTGGAACCAACATCAATTAGTGATATTGCTAACTTGATAAACTATTCAAACTCTCTTCCTCACTCTTTTACCATATCCCCTAGAGGACAAGCACATTCGGTTTTAGGACAAGCCATGACACAAAATGGAATTGTTGTGAATATGACTCAACTCAATTGGTATAGAAATGGGTCTGGAATTGTAGTATCTGATTGTGATGTGAAAAATCCATTAGGTTGTTATGTTGATGTGGGTGGAGAACAATTGTGGATTGATGTTTTGAATGCTACACTTAAGCATGGACTCACACCTCTCTCTTGGACTGATTACTTGTATTTGTCTGTTGGTGGCACTCTCTCTAATGCTGGAATTGGGGGCCAAACTTTTAGATTTGGACCACAAATCTCCAATGTTCTTGAATTGGATGTTATTACAGGGCAAGGAAATATTGTGACATGTTCACAAGAGAAGAACTCAGAGGTATTTTATGCCGTTCTTGGAGGACTAGGTCAATTTGGAGTGATAACCAGAGCAAGAATACTTCTTGGACCTGCACCAACTAGGGTAAAGTGGTTGCGTCTAATTTACAACGACTTTTCCGCATTTTCCACAGATCAAGAACATTTAATCTCATTTGATAGAAGAAATGACTCCAATGGAGCAGATTATGTTGAAGGCATGCTTCTATTGAACAAGCCACCATTGATTCTTTCCTTTTATCCACCTTCTGATCATCCAAGGATAACATCCCTAGTAACTCAATATGGCATCACCTATGTCCTAGAGCTTGTCAAATATTATGACACAAATTCTCAAGCAAATATCACAGAGGAAGTTGACAATTTGGTCAAAGGGTTAAAGTTTGTTCCAACGTTTATGTTCCAAAAAGATGTAACATACGAGGAATTTCTAGACAGAGTTCATTCAGAAGAGTTAATTCTTAGGTCAAAAGGACTTTGGGATGTTCCTCATCCTTGGTTGAATATGTTCATACCAAAATCTAGAATCTCAGATTTTAATGAAGGTGTTTTCAAGGGTATTATTCTTAAGCAAAATATTTCTGCCGGAATTGTCCTAGTCTACCCCATGAACCGCAACAAGTGGGATGATAGGATGTCTGCAATTACACCAGATGAAGATGTGTTCTACACTTTAGCTCTTTTGCATGCTGCAAAAGAAATGGATGAAGTGAAGACATTTCAGGCTCAAAACCATCAGATATTACAATTTTGTAATGATGCTGGTATTAAGGTCAAGGAATATCTTTCAGGAAACAAAACACATCAAGAATGGGTTGAACACTTTGGCGCTAAATGGCAACAGTTTGAAGAGAGAAAAGCTAAATTTGATCCCAAAAGAATATTGTCACCTGGGCAAGGGATTTTTCAGTAG 1569 0.3805 MNAMISTLVGLLWLSIIVFITHGKPLNLREIPIPKDLALKLSRNPQILSQASTDYGHIIHENPFAVLEPTSISDIANLINYSNSLPHSFTISPRGQAHSVLGQAMTQNGIVVNMTQLNWYRNGSGIVVSDCDVKNPLGCYVDVGGEQLWIDVLNATLKHGLTPLSWTDYLYLSVGGTLSNAGIGGQTFRFGPQISNVLELDVITGQGNIVTCSQEKNSEVFYAVLGGLGQFGVITRARILLGPAPTRVKWLRLIYNDFSAFSTDQEHLISFDRRNDSNGADYVEGMLLLNKPPLILSFYPPSDHPRITSLVTQYGITYVLELVKYYDTNSQANITEEVDNLVKGLKFVPTFMFQKDVTYEEFLDRVHSEELILRSKGLWDVPHPWLNMFIPKSRISDFNEGVFKGIILKQNISAGIVLVYPMNRNKWDDRMSAITPDEDVFYTLALLHAAKEMDEVKTFQAQNHQILQFCNDAGIKVKEYLSGNKTHQEWVEHFGAKWQQFEERKAKFDPKRILSPGQGIFQ* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1550 522 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 7 522 - -
Mtr2g1550 522 Gene3D - 46 521 IPR016167 -
Mtr2g1550 522 PANTHER GULONOLACTONE OXIDASE 7 522 - -
Mtr2g1550 522 ProSiteProfiles PCMH-type FAD-binding domain profile. 59 244 IPR016166 GO:0071949
Mtr2g1550 522 Pfam FAD binding domain 65 213 IPR006094 GO:0050660
Mtr2g1550 522 Gene3D - 247 480 IPR016170 -
Mtr2g1550 522 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 245 521 IPR015345 GO:0009690|GO:0019139|GO:0050660
Mtr2g1550 522 Gene3D - 114 246 IPR016169 -
Mtr2g1550 522 SUPERFAMILY FAD-linked oxidases, C-terminal domain 245 521 IPR016164 GO:0003824|GO:0050660
Mtr2g1550 522 SUPERFAMILY FAD-binding/transporter-associated domain-like 42 243 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1550 Mtr-Chr2 17276673 17280342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1550 K00279 - gmx:100816815 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4661 4 60593740 60598620 Mtr2g1550 2 17276673 17280342 PCT