Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4660 ATGGCTAAAAATTACCCTTTTTTCACCTATTTCATACTACTAATAACTATAACCCGTTTAACATCCACCACCGTAGGAAAAACCGATCAGTGCAAAACTCTACTACCACCAGAGCTAGCCAATATTAACACCATATCAACCAAACTCCATAATGACCCTAAAACCATCAAAATTGCTTCTAGTGACTATGGCAACATCATTCATGAATTCCCAATAGCAGTTTTTCATCCATCTTCTATACAAGACATAATAACCTTAATTAAAATCTCATACAATAGTTATGTTCCTTTCACTATAGCAGCCAGAGGACAAGGTCACTCCACTAATGGACAAGCCATGACTCATGATGGAATTGTAGTTGACATGGCTAGCTTCAGAAAACAAAGAAAAGGGGTTGCAATTAGTGTCTTTGAAGACCCTTTGATTGGTTACTATGTTGATGTTGGAGGAGAACAACTATGGATTGATGTTTTGTATGCAACACTTGAACATGGACTTGCACCTGTTTCTTGGACTGACTATCTTTACCTCACGGTTGGAGGAACACTTTCCAATGCTGGAATTAGTGGCCAGACGTTTCTTTACGGACCTCAAATCACCAACGTTCATGAATTCGATGTGATTACTGGAAAAGGAGATTTTGTAACATGCTCTTCTGAGAAGAATTCAGAGTTATATCACGCGGTTCTTGGAGGTTTAGGACAATTTGGAGTTATAACAAGGGCAAGAATTTCTCTTAAGCCAGCTCCCACAACGGTTAAGTGGATCAGATTGCTTTACAGTGACTTTTCTGCTTTTACCAAAGATCAGGAACGGTTAATCTCAATCAATGGAAGGAAATTGAACTTTTTGGAAGGGATGCTGCTAATGCAACAAGGCTCCATAAATAATTGGAGATCCTCTAATTTCTTCCCTCTATCTGATCAACATAGAATAGCTTCTTTAATAACCAAACACAGCATTATCTACTGCCTTGAATTTGCTAAATACTATGATCATCAATCCGAGAAAATGGTGGACAAGGAAATTGAAATTTTGCTTCAAGGACTAGCCTATATCCCTGGACTTCATTATGAGAAAAAGGTCTCATATGTTGAGTTCTTGAATAGAGTCCGAAGTGGAGAGTTGAAGCTTCAGTCACAAGGATTGTGGGAAGTTCCTCACCCATGGCTTAATTTATTTATACCAAAATCTCAAATATTGGATTTTAATTCAGGTGTATTCAAGGATATAATTTTTAAAAGAAACATCACCAGTGGAACTGTCTTGGTTTACCCTATGCATAAAAGCAAGTGGGACGATAAGATGTCAGCAATGATACCAAACGAGGATGTCTTCTACACGGTTGGATTCTTACACTCAAGTGGATTTGATAATTGGAAAGCATATGAATCTCAAAACAAAGAAATTTTGAAGTTTTGTACTGATGCGGGCATTAAGGTTAAGCAATATCTTCCCAACTACAGCATCCAGGAAGATTGGAAAAAACATTTTGGCACTAAATGGAAGAGTTTCTTGGAAAGCAAACACAAGTTTGATCCCAGAATGATTTTATCACCTGGACAAAAAATCTTCAACAAATAA 1584 0.3737 MAKNYPFFTYFILLITITRLTSTTVGKTDQCKTLLPPELANINTISTKLHNDPKTIKIASSDYGNIIHEFPIAVFHPSSIQDIITLIKISYNSYVPFTIAARGQGHSTNGQAMTHDGIVVDMASFRKQRKGVAISVFEDPLIGYYVDVGGEQLWIDVLYATLEHGLAPVSWTDYLYLTVGGTLSNAGISGQTFLYGPQITNVHEFDVITGKGDFVTCSSEKNSELYHAVLGGLGQFGVITRARISLKPAPTTVKWIRLLYSDFSAFTKDQERLISINGRKLNFLEGMLLMQQGSINNWRSSNFFPLSDQHRIASLITKHSIIYCLEFAKYYDHQSEKMVDKEIEILLQGLAYIPGLHYEKKVSYVEFLNRVRSGELKLQSQGLWEVPHPWLNLFIPKSQILDFNSGVFKDIIFKRNITSGTVLVYPMHKSKWDDKMSAMIPNEDVFYTVGFLHSSGFDNWKAYESQNKEILKFCTDAGIKVKQYLPNYSIQEDWKKHFGTKWKSFLESKHKFDPRMILSPGQKIFNK* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4660 527 Gene3D - 122 251 IPR016169 -
Mtr4g4660 527 ProSiteProfiles PCMH-type FAD-binding domain profile. 67 249 IPR016166 GO:0071949
Mtr4g4660 527 Gene3D - 252 484 IPR016170 -
Mtr4g4660 527 PANTHER GULONOLACTONE OXIDASE 12 526 - -
Mtr4g4660 527 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 250 525 IPR015345 GO:0009690|GO:0019139|GO:0050660
Mtr4g4660 527 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 12 526 - -
Mtr4g4660 527 Gene3D - 52 525 IPR016167 -
Mtr4g4660 527 SUPERFAMILY FAD-binding/transporter-associated domain-like 49 248 IPR036318 GO:0050660
Mtr4g4660 527 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 71 106 IPR006093 GO:0016491
Mtr4g4660 527 SUPERFAMILY FAD-linked oxidases, C-terminal domain 250 526 IPR016164 GO:0003824|GO:0050660
Mtr4g4660 527 Pfam FAD binding domain 71 218 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4660 Mtr-Chr4 60586303 60590126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4660 K00279 - gmx:100787676 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4660 4 60586303 60590126 Mtr4g4660 4 60586303 60590126 ECH
Mtr4g4660 4 60586303 60590126 Mtr2g1551 2 17308778 17314027 PCT