Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1551 ATGTCTCAAAATTACCCTTTTCCAATATACTTCATTCTCTTAATAATAACCATACCACGTTTAATATCAACCGTAGGTAAAACCGAGCAATGGAAATTCACTACAAAAAATTCCAACATATCTCAAAAACTCATAAACGATCCAAAAGCCATTGAACTAGCTTCAAGTGATTATGGCAACCTCGTACATGAATTCCCAGCAGCAGTGTTTCAACCATCAACGGTAAACGACATAGTAAGTCTTGTAAAGTTGTCGTATAATAGTTCTGTCCCTTTTCTTATAGCTGCAAGAGGACAAGGTCATTCCACACGAGGACAAGCTATGGCACGTGATGGTGTTGTTGTTGACATGAAAGGGTTGAGAAGATTGAAAAACAATAATAAAAATAATGAACATAATAATAAAAATGTTGGAATTGAGGTTTTTGAGGATCCTAAGGTTGGATTTGGATACTATGTTGATGTTGGAGGGGAACAACTATGGATTGATGTGTTGTATGAAACACTTGAGTATGGACTTGCACCTGTTTCTTGGACTGATTATCTTTACTTAACTATTGGAGGGACACTCTCTAATGCTGGTATTAGTGGACAAACCTTTCGTTATGGTCCTCAAATTACTAGTGTTCATCAATTGGATGTTGTTACTGGAAAAGGAGAATTTGTAACATGCTCTAAACAGAACAATTCAGAATTATTTAATGGAGTTCTTGGAGGATTAGGACAATTTGGAATTATAACAAGGGCAAGAATAGCTCTTGAGCCAGCACCAAAGAGGGTTAAATGGGTAAGACTTTTGTACAGTGATTTTTCTGTTTTTACCAAAGACCAAGAACGGTTAATCTCAATGAAAGGAAACAAAAATAGTGCATTGGATTATTTGGAAGGGATGGTTTTAATGAATCAAGGACCCATAAATAATTGGAGATCTTCTTTCTTCCCTTTAACCGACCATCATAGAATACTTTCCCTAGTAACTCAACATACGGTCCTATATTGCTTGGAAATTGCCAAATATTATGATTACCATTCTGAAAACAATGTGAACAAGGAAATTCAAGTTTTGCTCCAAGGACTGAACTATATCCCTGGATTTCATTATGAAAAAAATGTGTCATTTGTTGAGTTCTTGAATAGAGTGAGAAGTGGAGAGTTGAAGCTTCAATCACAAGGGCTATGGGATGTTCCTCATCCATGGCTTAATATGTTTATACCAAAATCAAGAATCTTAGATTTTAATTTAGGTGTCTTCAAGAAAATTATTCAAAAACGCAACATTACCACAGGACCTGTCTTGGTTTATCCCATGAATAGAAACAAATGGGACAATGAGATGTCAGCAACAATACCAGATGATGAGGAAGATATCTTCTATGCAGTTGGATTTTTGCACTCAAGTGGGTTTGATAATTGGAAAGCATTTGATGCTCAAAACAAAGAAATTTTGCAATTTTGTAATCATGCTAAGATTAACTATAAGTTATATCTTCCCCACTACAGCACACAGGAAGAGTGGACAAACCATTTTGGACCTAAAAAATGGAAAACTTTTTTACAAAGAAAAAATGAGTTTGATCCAAGAATGATTCTATCACCTGGACAAAGAATCTTCAACAACAATTAA 1623 0.3512 MSQNYPFPIYFILLIITIPRLISTVGKTEQWKFTTKNSNISQKLINDPKAIELASSDYGNLVHEFPAAVFQPSTVNDIVSLVKLSYNSSVPFLIAARGQGHSTRGQAMARDGVVVDMKGLRRLKNNNKNNEHNNKNVGIEVFEDPKVGFGYYVDVGGEQLWIDVLYETLEYGLAPVSWTDYLYLTIGGTLSNAGISGQTFRYGPQITSVHQLDVVTGKGEFVTCSKQNNSELFNGVLGGLGQFGIITRARIALEPAPKRVKWVRLLYSDFSVFTKDQERLISMKGNKNSALDYLEGMVLMNQGPINNWRSSFFPLTDHHRILSLVTQHTVLYCLEIAKYYDYHSENNVNKEIQVLLQGLNYIPGFHYEKNVSFVEFLNRVRSGELKLQSQGLWDVPHPWLNMFIPKSRILDFNLGVFKKIIQKRNITTGPVLVYPMNRNKWDNEMSATIPDDEEDIFYAVGFLHSSGFDNWKAFDAQNKEILQFCNHAKINYKLYLPHYSTQEEWTNHFGPKKWKTFLQRKNEFDPRMILSPGQRIFNNN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1551 540 Gene3D - 47 537 IPR016167 -
Mtr2g1551 540 PANTHER CYTOKININ DEHYDROGENASE 3 15 538 - -
Mtr2g1551 540 SUPERFAMILY FAD-binding/transporter-associated domain-like 42 255 IPR036318 GO:0050660
Mtr2g1551 540 PANTHER GULONOLACTONE OXIDASE 15 538 - -
Mtr2g1551 540 Coils Coil 120 140 - -
Mtr2g1551 540 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 66 101 IPR006093 GO:0016491
Mtr2g1551 540 Gene3D - 117 258 IPR016169 -
Mtr2g1551 540 Gene3D - 259 495 IPR016170 -
Mtr2g1551 540 SUPERFAMILY FAD-linked oxidases, C-terminal domain 257 538 IPR016164 GO:0003824|GO:0050660
Mtr2g1551 540 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 257 537 IPR015345 GO:0009690|GO:0019139|GO:0050660
Mtr2g1551 540 Pfam FAD binding domain 66 225 IPR006094 GO:0050660
Mtr2g1551 540 ProSiteProfiles PCMH-type FAD-binding domain profile. 62 256 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1551 Mtr-Chr2 17308778 17314027 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1551 K00279 - gmx:100804431 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4660 4 60586303 60590126 Mtr2g1551 2 17308778 17314027 PCT