Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4627 ATGGCTTCAACTTCCACAATTTCAATGGCTGTGCCATTAACCTGTGCCAGCAAGAAGCTAGAGGCACCAACCTCTCAAGCATTCTTGAAGGCACCATTGACTCTGAAGCCATCAAAGTCTGTGGCAGCAGCAAGGTTTGTAGTGAAAGCATCCTTGAAAGAGAAAATTGTGACAGGTTTAACTGCAGCTGCATTGACAGCTTCAATGATTTCTCCTGATGTGGCTGAAGCTGCTACTGTTTCACCTTCCCTCAAGAATTTCTTGCTCAGCATCGTTTCTGGTGGTGTTGTGGTTACTGCTATTCTTGGTGCTGTTATCGGTGTTTCCAATTTCGATCCTGTTAAGCGAGGTTGA 354 0.452 MASTSTISMAVPLTCASKKLEAPTSQAFLKAPLTLKPSKSVAAARFVVKASLKEKIVTGLTAAALTASMISPDVAEAATVSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKRG* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4627 117 PANTHER OS07G0673550 PROTEIN 1 116 - -
Mtr4g4627 117 Pfam Photosystem II reaction centre X protein (PsbX) 80 116 IPR009518 GO:0009523|GO:0015979|GO:0016020
Mtr4g4627 117 Gene3D Single helix bin 79 117 - -
Mtr4g4627 117 PANTHER EXPRESSED PROTEIN 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4627 Mtr-Chr4 60249375 60249969 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4627 - - gmx:100792794 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4627 4 60249375 60249969 Mtr4g4627 4 60249375 60249969 ECH
Mtr4g4627 4 60249375 60249969 Mtr2g1612 2 18148892 18149690 PCT