Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1612 ATGGCTTCCACTTCTGCAGTTTCAGTGGCAATGCCACTAACTTACACCAGCCAGAAGAGGGTGGTGATGAATAGCTCCGAGGCATTCTTCAATCCACCGCCTCTTCGGTCTTCAAAGGCTACGGAATCTTTGAAACGCAATGGAAGATTTCAAGTTAGGGCTTCCATGAAGGAGAAAGTTGTATCGGGGCTCACAGCGGCAGCATTGACAGCTTCAATGGTGGTTCCTGATGTGGCTGAAGCGGCCGTTTCACCTTCTCTCAAGAACTTCTTGCTCAGCATTGCAGCTGGGGGAGTTGTGGTTGTAGTCATTATAGGTGCGGTGATCGCTGTGTCCAATTTCGATCCCGTCAAGCGACGCTGA 363 0.5041 MASTSAVSVAMPLTYTSQKRVVMNSSEAFFNPPPLRSSKATESLKRNGRFQVRASMKEKVVSGLTAAALTASMVVPDVAEAAVSPSLKNFLLSIAAGGVVVVVIIGAVIAVSNFDPVKRR* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1612 120 Pfam Photosystem II reaction centre X protein (PsbX) 83 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
Mtr2g1612 120 PANTHER EXPRESSED PROTEIN 1 119 - -
Mtr2g1612 120 Gene3D Single helix bin 82 120 - -
Mtr2g1612 120 PANTHER OS07G0673550 PROTEIN 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1612 Mtr-Chr2 18148892 18149690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1612 - - gmx:100306291 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4627 4 60249375 60249969 Mtr2g1612 2 18148892 18149690 PCT