Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4492 ATGGTGTTGGCTTCACCAAAACCAATGAGGAATGAAACGATTTTACCAAATGATCTTATTCCAATAGTAGACCTTAAGAGTGAAAGGTCGGAAGTAATACAACAAATTGTGAAAGCAAGTGAAGAGTATGGTTTCTTCAAGGTGATAAACCATGGTATTAGTGATGGAACTATTGAGAAAATGGAAGAGGCAGGGTTTAGTTTCTTTGCAAAACCAATGTCTCAAAAGAAACAAGCTGCACCTGCTTATGGTTGTAAGAACATAGGATTCAATGGAGATATTGGTGAGGTTGAGTACCTTCTCCTCAATGCTAACACTTCCTCCATTGCTCAAATATCCAAAACTATATCCAATGATGATCCACATTCTAACTTCAGGTGTAGGGTGAGTGAATATACAGAAGCAGTGAAAGAGGTGGCATGTGAGATATTAGAGCTAATGGCAGAGGGTTTGGGGGTCCCTGATACAAAGGTTTTCAGCAGTTTGATAAAGGATATTGATAGTGACTCAGTTCTTAGGCTCAATCACTACCCACCTACACTTAACAAGGACAAGTCACATTCCAACAATGTTGGCTTTGGGGAGCATTCTGACCCTCAGATCTTGACCATTCTTAGATCTAATGACGTTTCTGGTCTTCAAATTTCTCTTCAACATGGTCTCTGGATTCCTGTTAACCCTGACCCAGAAGCTCTATGTATTAATATAGGTGATGTCCTTGAGGTTATGACAAATGGAAGGTTTGTAAGCGTGAGACATAGGGCAATGACAAACTCATACAAATCAAGAATGTCAATGGCATATTTTGGGGCTCCACCTCTAAATGCTTCCATTGTTGCTCCACCAGTTTTGGTTACACCAACCAGGCCCTCTCTCTTCAGACCATTTACTTGGGCCGACTACAAAAAAGCCACTTACTCTCTAAGGCTTGGTGACACCAGAATTCAACTTTTCAGAGCAAACATTGCATGA 972 0.4064 MVLASPKPMRNETILPNDLIPIVDLKSERSEVIQQIVKASEEYGFFKVINHGISDGTIEKMEEAGFSFFAKPMSQKKQAAPAYGCKNIGFNGDIGEVEYLLLNANTSSIAQISKTISNDDPHSNFRCRVSEYTEAVKEVACEILELMAEGLGVPDTKVFSSLIKDIDSDSVLRLNHYPPTLNKDKSHSNNVGFGEHSDPQILTILRSNDVSGLQISLQHGLWIPVNPDPEALCINIGDVLEVMTNGRFVSVRHRAMTNSYKSRMSMAYFGAPPLNASIVAPPVLVTPTRPSLFRPFTWADYKKATYSLRLGDTRIQLFRANIA* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4492 323 Pfam 2OG-Fe(II) oxygenase superfamily 169 270 IPR044861 -
Mtr4g4492 323 SUPERFAMILY Clavaminate synthase-like 18 312 - -
Mtr4g4492 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 20 80 IPR026992 -
Mtr4g4492 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 272 IPR005123 -
Mtr4g4492 323 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 320 - -
Mtr4g4492 323 Coils Coil 22 42 - -
Mtr4g4492 323 Gene3D - 3 303 IPR027443 -
Mtr4g4492 323 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4492 Mtr-Chr4 58874249 58877476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4492 20 319 Glycosyltransferase AT5G59530 27.950 3.56e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4492 K04125 - gmx:100783917 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4492 4 58874249 58877476 Mtr4g4492 4 58874249 58877476 ECH
Mtr4g4492 4 58874249 58877476 Mtr2g1173 2 12681154 12688746 PCT