Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1173 ATGGTGGTGGCTTCCCCAAATTCGATCTTAGGGGAAAGGATTATACCTATTGACCTACCAATGATAGACCTATCAGCTGAAAAATCAATGGTAATAAAACTCATAGTAAAAGCTTGTGAAGAATATGGTTTCTTCAATGTGATTAACCATGGTGTCCCTCATGACATCATATCCAAAATGGAAGAAGTAGGTTTTGATTTCTTTGCAAAACCAATGGAACAAAAGAAACTAGTTGCACTTGGTAATCCCTTTGGTTATGGATGCAAGAATATTGGGTTCAATGGAGACATGGGTGAGGTGGAATATCTTCTTCTCAATGCCAATGCTCCTTCTATTCCTAATGATTCATCAAACTTCAGCTCTAGTGTAAGTGCATATACAGAAGCTGTGAAGGAGCTGGCATGTGAGATATTGGAGCTAATGGCAGAAGGTTTGGGGGTCCCTGATACATCCATTTTCAGCACATTCATCACTCAACTTGATAATGACTCACTCCTTAGGTTCAATCACTACCCTCCTAAAGACTGCAAAGATAGAGACAACTCTAATTCCTACAACGTTGGCTTTGGAGAACATTCTGACCCTCAGATTCTTACTATCCTTAGATCCAACGATGTTGCTGGTCTCCAAATTTCACTTCAACATGGTGTGTGGAACCCAGTTACTCCTGACCCAGCTGCTTTCTGTGTTAACGTTGGTGATCTTCTTGAGGTTATGACAAATGGAAGATTTGTAAGCGTGAGACATAGGGCTGTGACCAACTCATACAAGTCTAGAATGTCGGTGGCATATTTTGGGGCTCCACCACTTGATGCATGCATTGTTGCTCCCTCAGTTATGGTTACACCAAACAGGCCCTCTCTTCTCTTCAAACCATTCACTTGGGCAGAATACAAGAAAGTCACTTACTCTCTAAGGCTTGGAGACAGCCGCATTGACCTTTTCAAGAATTGCACACAAATAGAGTAA 969 0.4149 MVVASPNSILGERIIPIDLPMIDLSAEKSMVIKLIVKACEEYGFFNVINHGVPHDIISKMEEVGFDFFAKPMEQKKLVALGNPFGYGCKNIGFNGDMGEVEYLLLNANAPSIPNDSSNFSSSVSAYTEAVKELACEILELMAEGLGVPDTSIFSTFITQLDNDSLLRFNHYPPKDCKDRDNSNSYNVGFGEHSDPQILTILRSNDVAGLQISLQHGVWNPVTPDPAAFCVNVGDLLEVMTNGRFVSVRHRAVTNSYKSRMSVAYFGAPPLDACIVAPSVMVTPNRPSLLFKPFTWAEYKKVTYSLRLGDSRIDLFKNCTQIE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1173 322 Pfam 2OG-Fe(II) oxygenase superfamily 163 266 IPR044861 -
Mtr2g1173 322 Gene3D - 8 305 IPR027443 -
Mtr2g1173 322 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 268 IPR005123 -
Mtr2g1173 322 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 317 - -
Mtr2g1173 322 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 317 - -
Mtr2g1173 322 SUPERFAMILY Clavaminate synthase-like 17 309 - -
Mtr2g1173 322 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 80 IPR026992 -
Mtr2g1173 322 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1173 Mtr-Chr2 12681154 12688746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1173 17 265 Glycosyltransferase AT5G59530 29.323 4.36e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1173 K04125 - gmx:100811043 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1173 2 12681154 12688746 Mtr2g1173 2 12681154 12688746 ECH
Mtr4g4492 4 58874249 58877476 Mtr2g1173 2 12681154 12688746 PCT