Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4441 ATGCAATCCTCTCTCTCACTCTCTTTCTCTCCCACTTCCTCTGCCGCCAGATCACATCACTCTTTTCCAGTATCCACCGGCAAACCTCTCAACCTCCGTTTCTGCGGTTTGAGACGCGAGGCTTTGGGTTTAGGTTTTAAAACTTCTATCAATCGCAATATCCGACAGCTTCCTTGCCGTCAACACTCCGCCACAGTATCAGCTGCTCGCTCTGATAATGGCAGCACTACTGGATCGTTTGATTATGATTTGTTGATTATTGGTGCTGGTGTTGGTGGTCACGGTGCTGCTCTTCACGCTGTCGAGAAGGGATTGAAAACAGCTATAGTGGAGGGAGATGTGGTGGGAGGGACATGTGTAAACAGAGGCTGCGTTCCTTCAAAAGCTCTTTTGGCTGTTAGCGGTCGTATGCGGGAACTAAAGAGTGATCATCACTTGAAGTCCTTGGGTTTACATGTTTCTTCTTCCGGGTATGACAGACAAGGAGTTGCTGATCATGCTAATAATCTTGCTTCCAAAATCCGTAGTAATTTGACAAACTCCCTAAAAGCGATAGGAGTAGACATACTTACTGGTTTTGGTACTATATTGGGTCCTCAAAAGGTGAAAATTGGCTCTTCAAACAACGTAGTAACTGCAAAAGATATCATCATTGCCACTGGTTCTGTTCCTTTCGTTCCTAAGGGTGTTGAAGTTGATGGGAAGACTGTGATTACCAGTGACCATGCACTCAAACTGGAATCTGTTCCCGATTGGATAGCAATTGTAGGGAGTGGGTATATTGGCCTTGAATTCAGTGATGTATATACGGCACTTGGAAGTGAGGTTACTTTTGTTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCCGAAATCAGCAAGCTGGCTCAAAGGGTTCTTGTAAATCCCCGTAATATTGATTATCATACTGGAGTTTTTGCATCCAAGATCACACCTGCAAGGGATGGAAAACCTGTCTTGATCGAACTTATTGATGCAAAAACTAAGGAGCCAAAGGACACTTTGGAGGTTGATGCTGCACTAATAGCAACTGGAAGGGCTCCATTCACACAAGGTCTAGGACTGGAGAATGTTGATGTGGCAACACAGCGAGGCTTTGTTCCTGTGGACGAGCGCATGCGTGTAATTGATGCAAATGGAAAGCTGGTACCTCATCTATACTGTATTGGAGATGCAAATGGAAAGATGATGCTTGCTCATGCCGCCAGTGCACAAGGAATTTCAGTGGTTGAACAAGTCACTGGAAGAGATCACGTGCTCAATCATTTAAGTATCCCAGCTGCATGTTTCACTCATCCTGAAATCAGCATGGTTGGATTGACAGAGCCTCAAGCAAGGGAGAAAGGTGAAAAGGAGGGATTTGACGTTAGTGTTGCTAAAACGAGTTTTAAAGCTAACACGAAAGCCCTAGCAGAAAATGAAGGGGAGGGACTTGCCAAGTTGATATACAGACCTGACAATGGAGAGATTCTAGGAGTTCATATTTTTGGTTTGCATGCAGCAGATCTCATCCATGAAGCATCTAATGCTATAGCATTAGGAACACGTATTCAGGACATAAAATTTGCAGTTCATGCACATCCAACTCTATCCGAGGTTCTTGATGAGCTATTTAAATCAGCAAAGGTTAAAGAACACGCATCTATCCCAGTAAGTGAACCAGTTGCAGTCTAA 1698 0.4411 MQSSLSLSFSPTSSAARSHHSFPVSTGKPLNLRFCGLRREALGLGFKTSINRNIRQLPCRQHSATVSAARSDNGSTTGSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVSGRMRELKSDHHLKSLGLHVSSSGYDRQGVADHANNLASKIRSNLTNSLKAIGVDILTGFGTILGPQKVKIGSSNNVVTAKDIIIATGSVPFVPKGVEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLVNPRNIDYHTGVFASKITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENVDVATQRGFVPVDERMRVIDANGKLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFDVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKSAKVKEHASIPVSEPVAV* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4441 565 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 14 556 - -
Mtr4g4441 565 Gene3D - 225 352 IPR036188 -
Mtr4g4441 565 PANTHER DISULFIDE OXIDOREDUCTASE 14 556 - -
Mtr4g4441 565 Gene3D - 82 415 IPR036188 -
Mtr4g4441 565 PIRSF Hg-II_reductase_MerA 43 547 IPR001100 GO:0016491
Mtr4g4441 565 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 432 546 IPR016156 GO:0016491|GO:0050660
Mtr4g4441 565 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 82 551 IPR006258 GO:0004148|GO:0050660
Mtr4g4441 565 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 116 126 IPR012999 GO:0016668
Mtr4g4441 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 84 103 - -
Mtr4g4441 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 213 231 - -
Mtr4g4441 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 252 270 - -
Mtr4g4441 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 345 361 - -
Mtr4g4441 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 379 401 - -
Mtr4g4441 565 Pfam Pyridine nucleotide-disulphide oxidoreductase 82 414 IPR023753 GO:0016491
Mtr4g4441 565 SUPERFAMILY FAD/NAD(P)-binding domain 70 423 IPR036188 -
Mtr4g4441 565 MobiDBLite consensus disorder prediction 1 22 - -
Mtr4g4441 565 Gene3D - 432 556 IPR016156 GO:0016491|GO:0050660
Mtr4g4441 565 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 433 544 IPR004099 GO:0045454
Mtr4g4441 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 83 105 - -
Mtr4g4441 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 115 130 - -
Mtr4g4441 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 216 225 - -
Mtr4g4441 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 252 277 - -
Mtr4g4441 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 346 360 - -
Mtr4g4441 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 394 401 - -
Mtr4g4441 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 429 450 - -
Mtr4g4441 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 498 513 - -
Mtr4g4441 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 520 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4441 Mtr-Chr4 58415505 58422990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4441 1 556 Acyl Lipid Metabolism Gene Families AT3G16950 82.624 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4441 K00382 - gmx:100809578 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4441 4 58415505 58422990 Mtr4g4441 4 58415505 58422990 ECH
Mtr4g4441 4 58415505 58422990 Mtr2g1226 2 13295253 13301352 PCT