Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1226 ATGACGCTATCACCAATCTCACTATCTTTCTCCTCCCCCACCACCATTTCAGGACCACACCACTGTTCCCTCTTCAACACCACCACCACTGCCACGTCACTCACTCTCCGTTTCTGTAGTCTCAGACGCGAAGCCTTCGCTTTCACTTCCCTCAGCCATCGCTCACCACGCAACCACCACCTCCGCCTGACACACCTCAATGCCATATCCGCCGCAATTTCAAATAACGGCACTCCTCCTAAATCATTCGATTACGATTTGCTCATTATTGGAGCTGGTGTTGGTGGTCACGGTGCCGCTCTTCACGCCGTCGAGAAGGGTTTGAAAACAGCAATTGTTGAGGGAGATGTTGTGGGAGGGACATGTGTCAACAGAGGTTGTGTTCCTTCTAAAGCTCTATTGGCTGTAAGTGGTCGTATGCGAGACCTCAGGAATGATCATCATTTGAAGTCTCTCGGCATTCAGGTTTCTAATGCTGGATATGACAGACAAGCAGTTGCTGACCATGCTAATAATCTTGCTTCAAAAATTCGCGGTAACTTGACCAACTCGATGAAAGCACTTGGAGTCGATATACTCACTGGTTTTGGAACTATTTTGGGTCCTCAAAAGGTGAAAATTGGCTCTTCCAACAATGTAGTAACTGCAAAAGACATCATCATTGCCACTGGTTCCGTTCCTTTTGTTCCTAAGGGAATTGAAGTCGATGGGAAGACTGTGATCACCAGTGACCATGCACTTAAGTTGGAGACAGTTCCTGACTGGATAGCAATTGTTGGAAGTGGTTATATCGGCCTTGAATTCAGTGATGTATATACAGCACTTGGAAGTGAGGTTACTTTTGTTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCTGAAATTAGCAAGTTGGCTCAGAGGGTTCTCATAAATCCCAGGAATATTGACTATCATACTGGCGTTTTTGCATCCAAGATAACTCCTGCAAGAGATGGAAAACCTGTAATGATTGAGCTCATTGATGCAAAAACCAAGGAGCAAAAGGAAACTTTAGAGGTGGATGCTGCATTAATAGCAACTGGAAGGGCTCCATTCACACAAGGACTGGGGTTGGAGAATATTGACGTTGCAACACAGCGTGGTTTTGTTCCCGTGGATGAGCGTATGAGAGTAATTGATGCAAATGGAAACCTGGTTCCTCATTTATATTGTATTGGCGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGTGGTTGAGCAAGTCACTGGAAGAGATCATGTGCTCAATCATTTAAGCATACCAGCGGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGTTTGACAGAGCCTCAAGCAAGGGAGAAAGGTGAAAAAGAAGGGTTTGACGTAAGTATTGCCAAAACAAGTTTTAAAGCTAATACAAAAGCCTTAGCAGAAAATGAAGGAGAGGGTCTTGCCAAGTTAATATACAGACCTGACAACGGAGAGATACTAGGAGTTCATATATTTGGGTTGCATGCTGCAGATCTCATCCACGAGGCTTCAAATGCAATAGCATTAGGGACACATATTCAGGATATTAAATTTGCAGTTCATGCCCATCCAACTTTGTCTGAGGTGCTTGATGAGCTATTTAAATCAGCAAAGGTTAAAGCACAAGCTTCTGACCCAGTAAAGGAACCAGTTTCAGTCTAA 1707 0.4429 MTLSPISLSFSSPTTISGPHHCSLFNTTTTATSLTLRFCSLRREAFAFTSLSHRSPRNHHLRLTHLNAISAAISNNGTPPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVSGRMRDLRNDHHLKSLGIQVSNAGYDRQAVADHANNLASKIRGNLTNSMKALGVDILTGFGTILGPQKVKIGSSNNVVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLETVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKITPARDGKPVMIELIDAKTKEQKETLEVDAALIATGRAPFTQGLGLENIDVATQRGFVPVDERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFDVSIAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTHIQDIKFAVHAHPTLSEVLDELFKSAKVKAQASDPVKEPVSV* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1226 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 87 106 - -
Mtr2g1226 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 216 234 - -
Mtr2g1226 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 255 273 - -
Mtr2g1226 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 348 364 - -
Mtr2g1226 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 382 404 - -
Mtr2g1226 568 PIRSF Hg-II_reductase_MerA 57 551 IPR001100 GO:0016491
Mtr2g1226 568 PANTHER DISULFIDE OXIDOREDUCTASE 13 560 - -
Mtr2g1226 568 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 119 129 IPR012999 GO:0016668
Mtr2g1226 568 Gene3D - 435 559 IPR016156 GO:0016491|GO:0050660
Mtr2g1226 568 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 435 549 IPR016156 GO:0016491|GO:0050660
Mtr2g1226 568 Pfam Pyridine nucleotide-disulphide oxidoreductase 85 417 IPR023753 GO:0016491
Mtr2g1226 568 Gene3D - 85 418 IPR036188 -
Mtr2g1226 568 SUPERFAMILY FAD/NAD(P)-binding domain 68 426 IPR036188 -
Mtr2g1226 568 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 85 555 IPR006258 GO:0004148|GO:0050660
Mtr2g1226 568 Gene3D - 228 355 IPR036188 -
Mtr2g1226 568 PRINTS Pyridine nucleotide disulphide reductase class-I signature 86 108 - -
Mtr2g1226 568 PRINTS Pyridine nucleotide disulphide reductase class-I signature 118 133 - -
Mtr2g1226 568 PRINTS Pyridine nucleotide disulphide reductase class-I signature 219 228 - -
Mtr2g1226 568 PRINTS Pyridine nucleotide disulphide reductase class-I signature 255 280 - -
Mtr2g1226 568 PRINTS Pyridine nucleotide disulphide reductase class-I signature 349 363 - -
Mtr2g1226 568 PRINTS Pyridine nucleotide disulphide reductase class-I signature 397 404 - -
Mtr2g1226 568 PRINTS Pyridine nucleotide disulphide reductase class-I signature 432 453 - -
Mtr2g1226 568 PRINTS Pyridine nucleotide disulphide reductase class-I signature 501 516 - -
Mtr2g1226 568 PRINTS Pyridine nucleotide disulphide reductase class-I signature 523 543 - -
Mtr2g1226 568 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 436 547 IPR004099 GO:0045454
Mtr2g1226 568 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 13 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1226 Mtr-Chr2 13295253 13301352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1226 4 559 Acyl Lipid Metabolism Gene Families AT3G16950 81.964 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1226 K00382 - gmx:100803176 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1226 2 13295253 13301352 Mtr2g1226 2 13295253 13301352 ECH
Mtr4g4441 4 58415505 58422990 Mtr2g1226 2 13295253 13301352 PCT