Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4203 ATGGGTTATCAAAAAAAGCTTCTGGGTATGTTTTTTTGGATGTACTTGGTAAGCTTCAGTTTCAGCTTCATTGGAGTGAATTGCATAGGATTAGGAAATGATTCAGCTGTGAAAGGGGTTGTTGTAATTCATGGCAAAGCTTTTATTGGAAGGATTGATAATGATTTTGTTTGTGCAACTCTTGATTGGTGGCCTCCTCAGAAATGTGACTGGGGAAGATGCAGTTGGGGTCATGCTTCTCTTCTTAATCTGGACCTCAACAACAAAATTTTGTTAAATGCAATAAAAGCCTTTTCACCTTTGAAAATTAGATTGGGTGGTACTTTGCAAGATATGGTCATATATGGAACTGAAGATAATAAGCAATCCTGTACTCCATTTGCTCTGAGCTCTAAAGAAAAGATTGATTTTGGTTTCACTAAAGGGTGCTTACCAATGCAAAGATGGGATGAGCTAAACAGCTTTTTCCAAAAAGCAGGGGTTAAAGTTATATTTGGATTAAATGCTCTTGCTGGAAGATCTTTTGAATCTGGTTCTGCTGTTGGACCTTGGAACTATACTAATGCCGAGTCTTTTATACGTTATACTGTTGCAAAGAAGTACACTATTCATGGTTGGGAATTCGGTAATGAATTGTGTGGAGGTGGAATTGGAACAAGTGTAGCTGCAGATCAATATGCTTCTGATGTAATTGTTTTAAGAAAGATAATTCAAGATGTATATAGAGGGGTTAAGCCAAAGCCACTCATTATTGCACCTGGAGGCTTCTTTGATGAAAATTGGTTTAAGGAATTCTTAAACAAATCGGACGAATCCACAAATGTGGTCACCCACCACATTTATAACCTTGGACCAGGAGGTGATCCGCACATAGTTGAAAGAATTCTCGATCCATCCTCTCTTAATGGAGTGGCTGGCATATTCAGCAGCCTTAAAAATGTACTTCAAAGTTCAAGAACCTCAGCTCAAGCATGGGTTGGTGAAGCAGGAGGGGCTTCGGGTAGTGGTCATCATCTGGTGTCTGATGCATTTGTCAACAGCTTTTGGTATTTGGATCAGCTTGGCATGTCAGCCACTTATGGCACAAGAACATACTGCAGACAGACTTTGATAGGAGGAAACTATGGTTTATTGAATACCACTACTTTCATGCCAAATCCAGATTATTATAGTGCTCTTCTTTGGCACCGACTCATGGGAGGACGTGTCCTGTCAACTACCTTCTATGGAACAAAGAAGATCAGAACTTATGCACATTGTGCAAAGGAATCTAAGGGAATCACAATACTGTTTCTCAATTTGGACAATAGCACCACTGTTCAAGCCAGAGTGGCCTTAAATTTTGCCAAGAAACCATCCCCTCATAATGTGGGAGAATCACAAAGAAGAGAGTACCATTTAACAGCAAAGGATGGAAATTTACATAGCCAAACTATGGTACTAAATGGAAACATTCTAAGTGGAAATTCAGCTGGTGACATTCCTTCATTGAATCCTATATATGTTGATTCTTCAAAGCCAATAACAGTTAGGCCTCTTTCTATTGTATTTGCACATATACCAGATGCTGCTGTTAAAGCTTGCAGCTAG 1590 0.3931 MGYQKKLLGMFFWMYLVSFSFSFIGVNCIGLGNDSAVKGVVVIHGKAFIGRIDNDFVCATLDWWPPQKCDWGRCSWGHASLLNLDLNNKILLNAIKAFSPLKIRLGGTLQDMVIYGTEDNKQSCTPFALSSKEKIDFGFTKGCLPMQRWDELNSFFQKAGVKVIFGLNALAGRSFESGSAVGPWNYTNAESFIRYTVAKKYTIHGWEFGNELCGGGIGTSVAADQYASDVIVLRKIIQDVYRGVKPKPLIIAPGGFFDENWFKEFLNKSDESTNVVTHHIYNLGPGGDPHIVERILDPSSLNGVAGIFSSLKNVLQSSRTSAQAWVGEAGGASGSGHHLVSDAFVNSFWYLDQLGMSATYGTRTYCRQTLIGGNYGLLNTTTFMPNPDYYSALLWHRLMGGRVLSTTFYGTKKIRTYAHCAKESKGITILFLNLDNSTTVQARVALNFAKKPSPHNVGESQRREYHLTAKDGNLHSQTMVLNGNILSGNSAGDIPSLNPIYVDSSKPITVRPLSIVFAHIPDAAVKACS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4203 529 Pfam Glycosyl hydrolase family 79, N-terminal domain 39 355 IPR005199 GO:0016020|GO:0016798
Mtr4g4203 529 SUPERFAMILY (Trans)glycosidases 52 399 IPR017853 -
Mtr4g4203 529 PANTHER HEPARANASE-RELATED 5 528 - -
Mtr4g4203 529 PANTHER HEPARANASE-LIKE PROTEIN 3 5 528 - -
Mtr4g4203 529 Gene3D Glycosidases 74 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4203 Mtr-Chr4 56109089 56112459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4203 38 529 Glycoside Hydrolase AT5G61250 47.784 7.63e-173 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4203 K07964 - gmx:100778008 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4203 4 56109089 56112459 Mtr4g4203 4 56109089 56112459 ECH
Mtr4g4203 4 56109089 56112459 Mtr2g1857 2 22106244 22110964 PCT