Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1857 ATGGGTTCTTGGATTCAGATTTTGTCTATATACTATTTGGCATGGTTCAGTTTTTTTGTTGTGAACACAGTGAGTGATGAAAGTGGATATGATGAAGATGTGAAGAAAGGGAATGTTGTGATTGATGGTAGTTCTGTGATTGGAAATATTGATGATGATTTTATTTGTGCAACTTTGGATTGGTGGCCTCCTCAGAAATGTGATTATGGTACATGTAGTTGGGGTCTTGCTTCTCTTCTCAATCTGGACCTCAACAACAAGATTTTCTTAAATGCAGTGAAAGCGTTTTCACCATTGAAACTAAGATTAGGTGGCAGTTTGCAAGATTTACTGGTATATGGGACTGATGATTACAACAAACCATGCACTCCTTTTGTTAGAAACGCGTCTGAAATGTTTGGATTCTCACAAGGGTGCCTCCCAATGCCAAGATGGGACGAACTTAATCATTTCTTCCAAAAAGCAGGGGCGAAGATTATTTTTGGATTGAATGCTCTTTATGGAAAGTCGGTACATCGTGGTCATACAGAAGGACCTTGGAACTACACCAATGCTGAATCGTTTATTCAATACACTGTTGGAAAGAACTATGACATTCATGGATGGGAACTTGGTAATGAATTGAGTGGGGGTGGAGTTGGAACAAGTGTCTCTGTAGATCAATATGCTTATGATGTTATTGCTTTAAGAGACGTAGTTTACAATGCATATAAAGACGTTGAGCCAAAGCCATTAGTCATTGCGCCTGGAGGTTTCTTTGATGCAACGTGGTTTAAGGATTTTATAAGCAAATCTAATAAGTCTGTGGATGTGGTCACACACCACATTTATAGCCTTGGACCAGGAGTTGATACGCACCTTGTGGAAAAAATTCTGAATCCTTCCTATCTTGATAGAGACAAAACTACATTCAAAGGCCTGAAAAATGTTCTTGAAAGTACAGGAACCTCAGCAACAGCATGGGTTGGTGAGTCAGGAGGGGCTTATAACAGTGGCCATCATCTTGTATCCGATGCATTTGTGTATAGTTTCTGGTATTTGGATCAACTCGGTATGTCTGCTTCTTATGACACTAAAACTTATTGCAGACAGAGTTTGATAGGAGGAAACTATGGTTTACTCAATACCACCAATTTCCTTCCAAATCCAGACTACTATAGTGCTCTTCTTTGGCACCGACTCATGGGAAGAGGTGTACTATCAACTACCTTCTCAGGAACAAACAAGATACGAGCTTATGCGCACTGTGCAAAACAATCCAAAGGAATCACAATACTTTTGATCAACCTGGACAACAGCACAACCGTTGAAGCGACATTTAGCGATGGTAAGAGTTCCTTGCATAGAAAGATGCCTTACTATTCAAGAATGATGAAACTACCTCTTCAAAGTTCAATTGAAAAATCAAGAGAAGAGTACCATCTAACTCCACAGGGTGGAAATATACATAGCCAAGTCATGTTACTGAATGGAAATGTTTTAAGCGTAAACTCGGATGGTGATATTCCTCCTTTGAAGCCTCTATATGTAAGCTCATCAAAGCCGATAAGGATTGCTCCTTTCTCCATTGTATTTTCTCATATACCTGATGCTGTTGTTTCAGCTTGCGGCTAG 1614 0.3965 MGSWIQILSIYYLAWFSFFVVNTVSDESGYDEDVKKGNVVIDGSSVIGNIDDDFICATLDWWPPQKCDYGTCSWGLASLLNLDLNNKIFLNAVKAFSPLKLRLGGSLQDLLVYGTDDYNKPCTPFVRNASEMFGFSQGCLPMPRWDELNHFFQKAGAKIIFGLNALYGKSVHRGHTEGPWNYTNAESFIQYTVGKNYDIHGWELGNELSGGGVGTSVSVDQYAYDVIALRDVVYNAYKDVEPKPLVIAPGGFFDATWFKDFISKSNKSVDVVTHHIYSLGPGVDTHLVEKILNPSYLDRDKTTFKGLKNVLESTGTSATAWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSASYDTKTYCRQSLIGGNYGLLNTTNFLPNPDYYSALLWHRLMGRGVLSTTFSGTNKIRAYAHCAKQSKGITILLINLDNSTTVEATFSDGKSSLHRKMPYYSRMMKLPLQSSIEKSREEYHLTPQGGNIHSQVMLLNGNVLSVNSDGDIPPLKPLYVSSSKPIRIAPFSIVFSHIPDAVVSACG* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1857 537 Pfam Glycosyl hydrolase family 79, N-terminal domain 37 351 IPR005199 GO:0016020|GO:0016798
Mtr2g1857 537 Gene3D Glycosidases 71 393 - -
Mtr2g1857 537 PANTHER HEPARANASE-LIKE PROTEIN 3 10 536 - -
Mtr2g1857 537 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Mtr2g1857 537 PANTHER HEPARANASE-RELATED 10 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1857 Mtr-Chr2 22106244 22110964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1857 30 536 Glycoside Hydrolase AT5G61250 47.592 6.36e-180 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1857 K07964 - gmx:100791916 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4203 4 56109089 56112459 Mtr2g1857 2 22106244 22110964 PCT