Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3997 ATGCGACGACGGGCTGCCGATTATCGGCGCCCGGTACGACGGAGGTTATCTTATTGGATCTGCCTTCTTCTCGCTTTCTTCTTCATTCTCGCTTCCGTTCTCTTCATTATTCAACATAATCATCACCAAGATCCGCTTCAATATTCTTTACTCGAGAGAAATGCAAGAGTTGACCATTTTGCCAAAGAGAGTTTGAATTTTACTGAAGAAATTTTAAGTGTTACTTCATTTTCTCGGCAGTTAGCGCAACAAATGATTCTGGCCAAAGCTTATGTGGTCATTGCCAAAGAACACAATAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGCTGCCAGCTTTTGCTTTCAAAAGCTGCCATGTCTGGGGAGCCTGTTACACTGGAAGAAGCAGAGCCAATTATTAAAAGCCTTACTTCTCTAATTTTTAAGGCACAAGATATCCATTATGACATTGCAACTACAATAGTGACCATGAAATCACATATTCATGCTCTTGAAGAGCGTGCCAATGCAGCAACAGTTCAAAGCGCCGTGTTTGGTCAACTAGCAGCTGAAGCACTACCCAAGAGTCTCCATTGCCTGAATGTGAAACTTGTCTCCGACTGGCTAAAGGTGCCATCCCTGCAGGAACTCTCAGATGAGAGGAAAAACTCCCCAAGGCTCACAGACAACAATCTATATCATTTCTGCATATTTTCTGATAATGTACTGGCAACATCTGTAGTTGTTAACTCAACCGTCTACAATGCCGATCATCCGAAGCAGTTGGTCTTTCACATTGTCACCAATGGAATCAATTATGGAGCAATGCAAGCATGGTTTCTTAGTAATGACTTTAAAGGAGCTACTGTAGAGGTACAAAACATTGAGGAGTTCCATTGGTTGAATGAATCTTATTCTCCAACTGTCAAGCAACTCCACAATCCTGACTCACGAACCTTCTACTTTGGGCTATATCAAGATGTAAACGCTGAACCAAAAATGCGGAATCCAAAGTATTTGTATTTATTGAATCATCTTCGGTTTTATATCCCCGAGATTTATCCACAACTTGAGAAGGTTGTTTTCCTGGATGATGATCTTGTTGTCCAGAAAGATCTGACCCCTCTTTTCTCACTGGATTTGCATGGGAATGTGAATGGTGCGGTTGAAACTTGTCTTGAAGCCTTTCATCGGTATTACAAGTATCTCAACTTCTCAAATTCAATTATAAGCTCGAGGTTTGATCCACAGGCATGCGCATGGGCATTTGGTATGAACGTTTTTGACTTGGTGGCATGGAGGAAGGCGAATGTGACCGCAAGATATCACTATTGGCAGGAGCAGAATGCTGATGGTACACTCTGGAAGTTGGGGACACTTCCTCCTGCTCTTCTGTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTCTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTTATTGAAAGTGCGGCAGTTATTCACTTCAATGGGAATATGAAGCCATGGCTAAAGGTAGCTATAGGCAGGTATAAGCCACTGTGGGACAAGTACATAAATCAAAGTCTCCCTCATCTTCAAGATTGTGTCCTGAGTTGA 1608 0.4235 MRRRAADYRRPVRRRLSYWICLLLAFFFILASVLFIIQHNHHQDPLQYSLLERNARVDHFAKESLNFTEEILSVTSFSRQLAQQMILAKAYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKAAMSGEPVTLEEAEPIIKSLTSLIFKAQDIHYDIATTIVTMKSHIHALEERANAATVQSAVFGQLAAEALPKSLHCLNVKLVSDWLKVPSLQELSDERKNSPRLTDNNLYHFCIFSDNVLATSVVVNSTVYNADHPKQLVFHIVTNGINYGAMQAWFLSNDFKGATVEVQNIEEFHWLNESYSPTVKQLHNPDSRTFYFGLYQDVNAEPKMRNPKYLYLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSRFDPQACAWAFGMNVFDLVAWRKANVTARYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKVAIGRYKPLWDKYINQSLPHLQDCVLS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3997 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 535 IPR029993 GO:0047262
Mtr4g3997 535 CDD GT8_like_1 230 523 - -
Mtr4g3997 535 Pfam Glycosyl transferase family 8 234 508 IPR002495 GO:0016757
Mtr4g3997 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 529 IPR029044 -
Mtr4g3997 535 PANTHER HEXOSYLTRANSFERASE 3 535 - -
Mtr4g3997 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 533 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3997 Mtr-Chr4 53755139 53758810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3997 1 532 Glycosyltransferase AT2G20810 55.493 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3997 K13648 - gmx:100798878 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3997 4 53755139 53758810 Mtr4g3997 4 53755139 53758810 ECH
Mtr4g3997 4 53755139 53758810 Mtr2g2080 2 31078855 31082432 PCT