Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2080 ATGGGGCGTCGGGCTGCCGAGTTTCGGCGCCCGATTCGACGAAAGTTGTCTTATGGGATCTGTTTTCTTCTTGGAGCATTTTCTGTTGTCGGTTTGGTTATGGTTTTTGTTCAACATAATTACCATCAAGATCGGGTCCAACATACCCTTATGGAGAGGAATACAAAGGATGAACATTTTCCTAAGGATAGGCTGAATTTTACTGAAGAAATTTTAAGTGCGACATCTTTTTCAAGGCAATTAACAGAGGAAATGGTTCTTGCTAAGGCTTATGTGGTTATTGCAAAAGAACACAATAATCTTCACCTAGCATGGGAGCTTAGCTCAAAGATTAGAAGTTGTCAGCTTTTGCTTTCAAAAGCCGCCATGACTGGAATGCCTGTTAACAAGGAAGAAGCCGAACCGATTATAAGAAGCCTATCAACTTTAATTTTCAAGGCGCAAGATATCCATTATGACATTGCAACAACTATCGTTACAATGAAATCACAGATTCAAGCACTTGAAGAGAGAGCGATTGCAGCTACAGTTCAAAGCAACGTGTTTGCTCAAATATCGGCTGAAGCACTACCGAAGAGTCTTCACTGCTTACATGTGAAACTTACTTCTGATTGGCTTAAGAAACCTTCCCTGCAGAAACTCTCGGATGAGACGAGAAACTCCCTCCGGCTCACAGATCAGCATCTATATCATTTCTGCATCTTTTCGGATAATGTACTGGCAACATCGGTTGTTGTTAACTCAACAGTTCTCAATGCTGAATTTCCAATAAAGTTAGTTTTTCATATCGTAACTGATGGTGTCAACTATGGAACGATGCAAGCATGGTTTCTCAGTAATGACTTTAAAGGAGCAACGATAGAGATCCAGAATGTTGAAGAATTTCATTGGCTGAATGAATCTTATTCTCCGATTGTCAAACAGCTGCTCGATTCAGAATCTCGAGCCTTTTATTTTGGGGCATATCCAGATGTAAATGCTGAACCGAAACTGCGGAACTCCAAATTTTTGTTATTACTAAACCATCTTCGGTTCTACATCCCGGAGATTTATCCACAACTTGAGAAGATTGTTTTCCTTGATGATGATGTTGTTGTCCAAAAAGACCTAACACCACTTTTCTCACTTGAATTGCATGGAAACGTAATCGGTGCAGTCGAAACCTGTCTTGAAGCATTTCACCGGTACTACAAATATTTCAACTTCTCAAATTCAATCATAAGCTCAAAGTTTGATCCACAGGCATGCGCGTGGTCGTTAGGCATGAATGTTTTTGACTTGATTCAATGGAAGAAAGCAAATGTGACCGCAATATATCATTATTGGCAAGAGAAGAATGCCGACGGCTCACTCTGGAAGCTCGGTACACTTCCTCCTGCACTTCTTAGTTTTTATGGTTTGGCCGAACCACTTGACCGGAGATGGCATGTTTTAGGATTAGGGCATGACCTCAATATCGATAATCGACTCATTGAAAGTGCGGCTGTTATTCACTTCAATGGGAACATGAAACCATGGTTGAGATTATCTATAAGCAGGTATAGGCCACTATGGCACAAGTACATAAATCAAAGTCACCCTTATTTTCAAATATGTGCTATAGGTTAA 1608 0.4042 MGRRAAEFRRPIRRKLSYGICFLLGAFSVVGLVMVFVQHNYHQDRVQHTLMERNTKDEHFPKDRLNFTEEILSATSFSRQLTEEMVLAKAYVVIAKEHNNLHLAWELSSKIRSCQLLLSKAAMTGMPVNKEEAEPIIRSLSTLIFKAQDIHYDIATTIVTMKSQIQALEERAIAATVQSNVFAQISAEALPKSLHCLHVKLTSDWLKKPSLQKLSDETRNSLRLTDQHLYHFCIFSDNVLATSVVVNSTVLNAEFPIKLVFHIVTDGVNYGTMQAWFLSNDFKGATIEIQNVEEFHWLNESYSPIVKQLLDSESRAFYFGAYPDVNAEPKLRNSKFLLLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLELHGNVIGAVETCLEAFHRYYKYFNFSNSIISSKFDPQACAWSLGMNVFDLIQWKKANVTAIYHYWQEKNADGSLWKLGTLPPALLSFYGLAEPLDRRWHVLGLGHDLNIDNRLIESAAVIHFNGNMKPWLRLSISRYRPLWHKYINQSHPYFQICAIG* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2080 535 CDD GT8_like_1 230 523 - -
Mtr2g2080 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 231 528 IPR029044 -
Mtr2g2080 535 PANTHER HEXOSYLTRANSFERASE 3 533 - -
Mtr2g2080 535 Pfam Glycosyl transferase family 8 234 508 IPR002495 GO:0016757
Mtr2g2080 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 532 IPR029044 -
Mtr2g2080 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 533 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2080 Mtr-Chr2 31078855 31082432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2080 1 532 Glycosyltransferase AT2G20810 51.583 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2080 K13648 - gmx:100817381 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3997 4 53755139 53758810 Mtr2g2080 2 31078855 31082432 PCT