Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3922 ATGGTTGGAGACAGAACCAAGAAGCAGAAACTCACCGAAAATCCCGAAGAAGTTGACGCTGAACTCATCCTCTCCATCGAGAAATTGCAAGAGATCCAAGATGACCTCGAAAAGATTAATGATGAAGCGAGTGATAAGGTTCTCGAAATTGAGCAGAAGTATAATGAGATTAGGAAGCCGGTTTACGATAAGCGGAACGAGATTATCAAATCTATTCCTGATTTCTGGTTGAATGCTTTTTTGAGCCATCCTACCCTCAGTGAACTTCTGAATGACGAAGATCAAAAAATATTCAAGTATTTGAGTTCTCTTGAGGTCGAAGATAATAAGGATGTCAAATCTGGATACACAATCACCCTTAATTTCAATCCCAATCCCTATTTTGAGGATTCAAAACTTTCAAAGACTTTTACCTTCCGTGAAGAAGGAACAACAGAGATCACTGCTACCCCCATAAAATGGAAAGAGGGCAAGGGAATACCCAATGGCGACAATCATGAGAAGAAAGGGAACAAAAGGCCTCCTGTTGATGTCAGTTTCCTTAGTTGGTTTTGTGACTGTGAGCAGAAAGATGATATGGCTGACATTCACGACGAGCTTGCAGAATTAATCAAGGATGACTTATGGTCAAATCCACTCATTTATTTCAATAGTGAGGAGCCTGATGAAGAGGATGCCGATGATGAAGCTGATGATGAGGAAAAAGATGAGGACGACTCTGAAGAAGAGGATGACGAAGAGGGTGATGATGAGGAAGGCAATTGA 765 0.4105 MVGDRTKKQKLTENPEEVDAELILSIEKLQEIQDDLEKINDEASDKVLEIEQKYNEIRKPVYDKRNEIIKSIPDFWLNAFLSHPTLSELLNDEDQKIFKYLSSLEVEDNKDVKSGYTITLNFNPNPYFEDSKLSKTFTFREEGTTEITATPIKWKEGKGIPNGDNHEKKGNKRPPVDVSFLSWFCDCEQKDDMADIHDELAELIKDDLWSNPLIYFNSEEPDEEDADDEADDEEKDEDDSEEEDDEEGDDEEGN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3922 254 MobiDBLite consensus disorder prediction 214 254 - -
Mtr4g3922 254 MobiDBLite consensus disorder prediction 159 173 - -
Mtr4g3922 254 SUPERFAMILY NAP-like 9 216 IPR037231 -
Mtr4g3922 254 Pfam Nucleosome assembly protein (NAP) 70 217 IPR002164 GO:0005634|GO:0006334
Mtr4g3922 254 MobiDBLite consensus disorder prediction 218 254 - -
Mtr4g3922 254 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 247 - -
Mtr4g3922 254 Gene3D Nucleosome assembly protein 73 220 - -
Mtr4g3922 254 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 247 IPR002164 GO:0005634|GO:0006334
Mtr4g3922 254 MobiDBLite consensus disorder prediction 154 173 - -
Mtr4g3922 254 Coils Coil 22 53 - -
Mtr4g3922 254 Coils Coil 223 243 - -
Mtr4g3922 254 Gene3D - 2 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3922 Mtr-Chr4 52967969 52972739 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3922 K11290 - gmx:100808081 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3922 4 52967969 52972739 Mtr3g0931 3 14098722 14103490 ECH
Mtr4g3922 4 52967969 52972739 Mtr4g3922 4 52967969 52972739 ECH
Mtr3g0931 3 14098722 14103490 Mtr4g3922 4 52967969 52972739 PCT