Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0931 ATGGTGGCCGACAAGTCTAAGAAGTTGAAAGTTTCTGAAAAGGGTGAGAACGCTGAAGAGATCGACGGAGAACTTGTTCTCTCCATTGAAAAGTTGCAGGAAATTCAAGATGAGATTGAAAAGATCAATGAGGAGGCTAGCGATAAAGTTCTTGAAATAGAGCAGAAGTACAATGAAGTAAGGAAACCTGTGTATGACAAGCGCAATGATGTGATCAAGTCCATTCCCGATTTCTGGCTAACTGCGTTTTTGAGCCATCCTGTTCTTGGTGATCTCTTAAACGAAGAGGATCAGAAGATATTTAAGCATTTAATCTCTCTTGAGGTGGAAGATCATAAAGATGTTAAATCAGGCTATTCGATCACATTTAACTTCAACTCCAATCCCTATTTTGAGGATTCAAAACTTGTCAAGACTTTTACCTTCCTTGAAGAAGGAACCACAAAGCTTACCGCCACACCCATAAAATGGAAAGAGGGCAAGGGCATTCCCAATGGAGTTAGTCATGAGAAGAAAGGGAACAAGCGAGCTGCTTCTGATATCAGTTTCTTTACCTGGTTTTGTGACACTGAACAGAAAGATGAAATGGGTGACATTCATGATGAGATTGCTGAAATGATCAAGGATGATTTATGGCCGAATCCACTTAATTATTTCAACAGTGAGGACCCTGATGAAGCAGAGGAGGATGATGATGAAGCTGGTGATGCGGGAAAGGATGATGATGACTCTGAAGATGATGATGATCAAGAGGATGATGACGATGACGAGGAAGAAGAATAG 783 0.4087 MVADKSKKLKVSEKGENAEEIDGELVLSIEKLQEIQDEIEKINEEASDKVLEIEQKYNEVRKPVYDKRNDVIKSIPDFWLTAFLSHPVLGDLLNEEDQKIFKHLISLEVEDHKDVKSGYSITFNFNSNPYFEDSKLVKTFTFLEEGTTKLTATPIKWKEGKGIPNGVSHEKKGNKRAASDISFFTWFCDTEQKDEMGDIHDEIAEMIKDDLWPNPLNYFNSEDPDEAEEDDDEAGDAGKDDDDSEDDDDQEDDDDDEEEE* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0931 260 Coils Coil 25 59 - -
Mtr3g0931 260 MobiDBLite consensus disorder prediction 212 260 - -
Mtr3g0931 260 SUPERFAMILY NAP-like 7 219 IPR037231 -
Mtr3g0931 260 MobiDBLite consensus disorder prediction 222 260 - -
Mtr3g0931 260 Gene3D Nucleosome assembly protein 76 223 - -
Mtr3g0931 260 Pfam Nucleosome assembly protein (NAP) 73 220 IPR002164 GO:0005634|GO:0006334
Mtr3g0931 260 Gene3D - 1 75 - -
Mtr3g0931 260 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 251 - -
Mtr3g0931 260 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 251 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0931 Mtr-Chr3 14098722 14103490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0931 K11290 - gmx:100793432 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3922 4 52967969 52972739 Mtr3g0931 3 14098722 14103490 ECH
Mtr3g0931 3 14098722 14103490 Mtr3g0931 3 14098722 14103490 ECH
Mtr3g0931 3 14098722 14103490 Mtr4g3922 4 52967969 52972739 PCT