Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3836 ATGGGAAATTGTCAAGCTATTGATACAGCAACTCTTGTAATACAACAACCAAATGGTAAAGAAGAAAGGTTGTATTGGCCAGTCACTGCTAGTGAAGTGATGAAGACACACCCTGATCACTATGTTGCTCTTCTTATCTCCACAACATTATGCACTTCAAAAGACAAAGAAAATTGTTCAAATAAGCGTAGCGACGACGACGACGACAACAACAATAACAAAGTTCGTATTACACGTATAAAACTTCTTAAGCCAACAGATACACTTTTGCTTGGTCAAGTTTATAGACTCATCTCAGCTCAAGAGGTTACAAAGGGTATGTGGGCAAAGAAACAAGCAAAGATGAAGAGAAACTCTTTGCCAGAATCAGCACAAAAGTCAAATCAGATTAAGGAAAGGATTAATGATAAAACAGCTAATAGGTCTGAACCTAAAGATAACAAGGAAACAAAATCTGAAAGACATGAGTCAAGGACAAAAGCAACAACAAATGGTGGCAATCATAACAATAAGTCAAGAACATGGCAACCCTCTTTACAAAGCATCACTGAATCTGCCAGCTGA 564 0.3759 MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCSNKRSDDDDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEVTKGMWAKKQAKMKRNSLPESAQKSNQIKERINDKTANRSEPKDNKETKSERHESRTKATTNGGNHNNKSRTWQPSLQSITESAS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3836 187 Pfam PADRE domain 1 184 IPR025322 -
Mtr4g3836 187 MobiDBLite consensus disorder prediction 112 187 - -
Mtr4g3836 187 MobiDBLite consensus disorder prediction 162 187 - -
Mtr4g3836 187 PANTHER EXPRESSED PROTEIN 1 187 - -
Mtr4g3836 187 PANTHER DUF4228 DOMAIN PROTEIN 1 187 - -
Mtr4g3836 187 MobiDBLite consensus disorder prediction 129 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3836 Mtr-Chr4 52054358 52055958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3836 - - gmx:100500500 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3836 4 52054358 52055958 Mtr4g3836 4 52054358 52055958 ECH
Mtr4g3836 4 52054358 52055958 Mtr3g2483 3 38767295 38768599 PCT