Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2483 ATGGGAAATTGTCAAGCAATTGATGCTGCAACACTAGTGATACAACACCCAAGTGGCAAAACAGAGAAATTTTATTCTTCTCTTAGTGCTAGCCAAGTTATGAAAATGAATCCCGGTCATTGTGTTGCTCTTCTCATCTCCACCACAGTATATCCAAACAAGGACATTCAAAATTGCTCCAAAAATAATAATGGTGACACCAAAACCAACCAAGTTCGATTAACTCGCATAAAGCTTCTTAAACCTAATGATACTCTAATTCTTGGTCATGTTTATAGACTCATCACAACTCAAGAGGTTATGAAGGGCATAAGGGAAAAGAAACAAGCAAAGATAAAACAGAACATGTCTCATAAACCTGATTTGGTGAAGACAACTTTGGGGTTAGAAATGGAGAAAAAAGCAAAGAGGTTTGACACAAAGGACAATAAGGCTACCAAACCGGAAAGATCTCAAGGAAGGACCACATCAACTAATAATGCTGTCATTGTCACAGCTAAGACAAGATTCTGGCAACCATCTTTACAGAGTATCTCAGAGATAGCCAGCTGA 552 0.3822 MGNCQAIDAATLVIQHPSGKTEKFYSSLSASQVMKMNPGHCVALLISTTVYPNKDIQNCSKNNNGDTKTNQVRLTRIKLLKPNDTLILGHVYRLITTQEVMKGIREKKQAKIKQNMSHKPDLVKTTLGLEMEKKAKRFDTKDNKATKPERSQGRTTSTNNAVIVTAKTRFWQPSLQSISEIAS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2483 183 Pfam PADRE domain 1 180 IPR025322 -
Mtr3g2483 183 PANTHER DUF4228 DOMAIN PROTEIN 1 183 - -
Mtr3g2483 183 PANTHER EXPRESSED PROTEIN 1 183 - -
Mtr3g2483 183 MobiDBLite consensus disorder prediction 133 159 - -
Mtr3g2483 183 MobiDBLite consensus disorder prediction 133 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2483 Mtr-Chr3 38767295 38768599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2483 - - ccaj:109810780 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2483 3 38767295 38768599 Mtr3g2483 3 38767295 38768599 ECH
Mtr4g3836 4 52054358 52055958 Mtr3g2483 3 38767295 38768599 PCT