Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3812 ATGGAACAACCAATCTACAATTTACCGAAACATGATTCCGCCGGCGAAGATGAATCAGCGATTTCCGATTGCGAGAGTGTCGCATCTGGCGGCCACGATTCCAGTAGACCTGTTCGGAAGACGACGGAGGGTGCGGATATAAACCTAATCCGAAGCAGATTCGTTTGTGGTTTAAGCGCGCAAGGGTTGAAACCCTATGGAGTAGCGATTTTCAGGAATCCTTGTAAAACGGTAATGGCACAAGCGAGGATTCAATCGTTTGAGATCTTCGCACGTGCGGTTGCTAAAATGCGCGGTGGGAATGCTAATGTGAAACATGTTTGGTATGGTGCTTCTAGTAGAGAAGAGATTGTTGATATTATTCAACACGGTTTTGGTTATGTTCATAGCAATGGTCTGCGTCTTTCTCCGAATGATACTCCACTTGAAAGTGTGAAAAGAACTGTTGTTGACAAACAAGGATTTAGGCACTTGTTGCTTTGTCGTGTGATCATGGGAAAATTGGAGGCTGTGCCTGCAGGTTCTGATCAACGCAGACCGAGTTCGGAAGAATTTGATTCTGGGGTGGATAGTTTTTCATCTCCCAAAGAGTTCATTGTTTGGAGTAACAAGATCAACACACATGTCTTGCCTGAATATGTTTTGAGTTTCAAACTTGCTTCCGACAAAGGGCATGAGAAGGTTGGAGTTGGAGGGCAACATATGAGACCGTCTTCGCCTTTTATGCAATTCCCGACTCTGATTTCTGCGCTTTCAAAGATATTGCCTCCGTCTGATATTGTTTCCATTGCCAAGTTTCACAAGGAGTATCGGGATAAGAAGATTTCGCGACATGAAATGATACAAAAAGTTAGAAAAGTTGCAGGTGACAAATTGTTGTTTTCTGTTATCAAATCTTTCAGAGCGAAGAAAATGCATGCAATCTTTAAGCAAGCCGGACCGCCAGCAACGTGGATGGAATGCTCGTCCATACAATAA 978 0.4366 MEQPIYNLPKHDSAGEDESAISDCESVASGGHDSSRPVRKTTEGADINLIRSRFVCGLSAQGLKPYGVAIFRNPCKTVMAQARIQSFEIFARAVAKMRGGNANVKHVWYGASSREEIVDIIQHGFGYVHSNGLRLSPNDTPLESVKRTVVDKQGFRHLLLCRVIMGKLEAVPAGSDQRRPSSEEFDSGVDSFSSPKEFIVWSNKINTHVLPEYVLSFKLASDKGHEKVGVGGQHMRPSSPFMQFPTLISALSKILPPSDIVSIAKFHKEYRDKKISRHEMIQKVRKVAGDKLLFSVIKSFRAKKMHAIFKQAGPPATWMECSSIQ* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3812 325 MobiDBLite consensus disorder prediction 1 40 - -
Mtr4g3812 325 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 11 310 IPR044964 -
Mtr4g3812 325 Gene3D - 42 219 - -
Mtr4g3812 325 ProSiteProfiles PARP catalytic domain profile. 32 239 IPR012317 GO:0003950
Mtr4g3812 325 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 11 310 - -
Mtr4g3812 325 Pfam RCD1-SRO-TAF4 (RST) plant domain 236 301 IPR022003 -
Mtr4g3812 325 ProSiteProfiles RST domain profile. 235 306 IPR022003 -
Mtr4g3812 325 SUPERFAMILY ADP-ribosylation 80 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3812 Mtr-Chr4 51868944 51872783 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3812 - - gmx:100784311 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3812 4 51868944 51872783 Mtr3g2462 3 38547266 38550801 PCT