Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3799 ATGGAAGCAATAGAAATTGTCCATTTATCTAGTGACAATGAAGGGGGGGATGACATTGAAGCTGTTTGTAGTGCAAACCAAATTGAGACTAAAACACGCCAACTAACCAAGCATAAAAGTCATTCTGCAAGTCAAATTTCGGAAGAAAATATAGTTTCCAGTGGTCTTAGTTCTTGTCGCAGTGTTACATGTGCATCGGAATCAGGATTTTTGTCAGTGGATGACATTAGCCTTTCCAGTCCACAACCAATTTCTGCAGCACCGCTATGTAGAAAGTTTTGGAAAGCAGGAAACTATGATAACAGACTTGGTTCAAAAGTCAGCTCACAATGTGCAAAAAACTATCTTCATGTCCATCCCTTGTTCCTTCACTCGAACGCAACTTCACACAAGTGGGTATTTGGTGCCATAGCCGAGCTTCTTGATAATGCAGTTGATGAGATACATAATGGGGCTACTTTTGTTAAGGTTGATAAGATTTTAAATCCGAAGGATGGAAGTCCAGCATTGTTGATTCAAGACGATGGTAATGGAATGGGTCCAGAAGCAATGCAACGCTGCATGAGTTTTGGATTTTCGGATAAGATCTCAGAATTTGCAATTGGACAGTATGGAAACGGTTTTAAGACTGGTAGTATGAGATTGGGTGCAGATGCAATTGTCTTCAGCTGCCACGTGAATGATATGGTATGTACTAAAAGCATTGGACTTCTGTCTTATACATTCTTGATGCGAGCTCAACTTGACAGAATTGTAGTGCCCATGGTAAATTACAAGTGTAATCCATCAACCGGATACCTGGAAAAACTAAATCACCAGGAGCATTTTAAGTCTAATATGTCCTTGTTGCTGGACTGGTCTCCATTTTTATCAGAAGCAGAAATTGTGAAACAATTTGATGACATTGAAAATCATCATGGGACTAAAATTATTATCTTCAATTTATGGTTCAATGATGATGAGAATTTGGAACTAGACTTTGATACCGATCCTCAGGATATCCTTATTGCTGGAGATGTCAAGAAGATTGATACGGTTCCAGCCAGGAAGAGAGTAAATGAGCAACAGCTTGCTAACAGGCTTCATCACTCTTTACGTGATTACTTGTCCATATTGTACTTGTGGGACCGGGTGCCAAACAGTTTTAGAATTATATTGCGAGGGCAAGTTGTGAAGTTTCGTAACATAGCAGACGATCTTACGGATCATGCCTTTGTCAAGTATAGACCACACGGTGGTGGTTTAGAAGAGGCAATATTTGTGACAATTGGATTTCTTAAGGAAGCTCCTGATGTTGACATCCACGGCTTCAATGTATATCACAAAAATCGGCTGATACTGCCATTTTGGCCAGTTGTGAGCTTTAAAGGCAATAGAGGCAGAGGAATTGTTGGCGTGTTGCAAGCAGATAATGTTCAGCCAACTCATAATAAGCAAGATTTTGAGAGAACTTCCCCATTTCAAAAGCTTGAACTGCGTTTGAAGGATATGACATGGGAATACTGGGATCGTTTTTCTCATAAAATTGGGTATCAGAAAAGGAAGCGTAGAAATCCTGTTGGCCTACCTAATCCATCAATGAAGAAACCACTTGTTACAGAAAAACCAGTTGCACTGGATAACTGTTCTTCACCTGTACCAATATCTAACGCACAAGATGGATCTGAACAAACATCTCTTACGAAGAGGAAGACACGTGGATTTACAGATCATCATGAGATGAAAAGGCAAGCAGTGGAAAAGAATGTACAGACTACCGCATCTCCTGCGGACCAGATGGTAGACCAAGAAATTGTGAACTTACTAGAATTCAACAAGCAACTCAATGCCGACTGTTTTGCATTTGAGAAGATGGAGGAGGAACTTAACCTTGAGGTGACACAGCTTAGGAGTAGACTCGAAGAAGCAAAGCTTGAGTATAATAGACTTTTGGACGAAGCAATAGACTTAAAATGTCTGGACTGA 1965 0.402 MEAIEIVHLSSDNEGGDDIEAVCSANQIETKTRQLTKHKSHSASQISEENIVSSGLSSCRSVTCASESGFLSVDDISLSSPQPISAAPLCRKFWKAGNYDNRLGSKVSSQCAKNYLHVHPLFLHSNATSHKWVFGAIAELLDNAVDEIHNGATFVKVDKILNPKDGSPALLIQDDGNGMGPEAMQRCMSFGFSDKISEFAIGQYGNGFKTGSMRLGADAIVFSCHVNDMVCTKSIGLLSYTFLMRAQLDRIVVPMVNYKCNPSTGYLEKLNHQEHFKSNMSLLLDWSPFLSEAEIVKQFDDIENHHGTKIIIFNLWFNDDENLELDFDTDPQDILIAGDVKKIDTVPARKRVNEQQLANRLHHSLRDYLSILYLWDRVPNSFRIILRGQVVKFRNIADDLTDHAFVKYRPHGGGLEEAIFVTIGFLKEAPDVDIHGFNVYHKNRLILPFWPVVSFKGNRGRGIVGVLQADNVQPTHNKQDFERTSPFQKLELRLKDMTWEYWDRFSHKIGYQKRKRRNPVGLPNPSMKKPLVTEKPVALDNCSSPVPISNAQDGSEQTSLTKRKTRGFTDHHEMKRQAVEKNVQTTASPADQMVDQEIVNLLEFNKQLNADCFAFEKMEEELNLEVTQLRSRLEEAKLEYNRLLDEAIDLKCLD* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3799 654 Pfam Morc6 ribosomal protein S5 domain 2-like 363 502 IPR041006 -
Mtr4g3799 654 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 132 336 IPR036890 -
Mtr4g3799 654 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 35 646 IPR045261 GO:0016887
Mtr4g3799 654 Gene3D - 119 328 IPR036890 -
Mtr4g3799 654 PANTHER PROTEIN MICRORCHIDIA 6 35 646 - -
Mtr4g3799 654 Coils Coil 619 653 - -
Mtr4g3799 654 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 134 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3799 Mtr-Chr4 51767610 51780876 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3799 - - mtr:MTR_4g105530 1329.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3799 4 51767610 51780876 Mtr3g2446 3 38323735 38337086 ECH
Mtr4g3799 4 51767610 51780876 Mtr4g3799 4 51767610 51780876 ECH