Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2446 ATGGGGAGTGTAGAGGTTATTGACTTATCTAGTGACGACGAAAGTGAAAAGGTTCGAGGTATTGTACCTGTTAAATTGGAGCCAGGTGCTGTGAAACAAGAACACAGGCGGCAAGCCAAGTGTGGGAAATCCCAAAGTCGTGCGACGGGGAAAGATGTCGAGGAAAATTTTAGTGGCAGTGTTCCAAGTACAGGTCATAGTAATTCCAGTGTGTTGGAGCAGGGGCCGTCGCCAATCGATGATACTGGTATCTCCTATGCATCTCCCCTTTGTGCTGCTCCGCTTTCGAGGCAGTTTTGGAAAGCTGGAAGCTATGACGAAGGACATGCTTCTCAAATTGGAGTCAAAGATGGGAAAAACTATCTACATGTACACCCCATGTTCCTTCACTCAAATGCAACTTCCCACAAGTGGGCATTTGGTGCCATAGCAGAGCTTCTTGATAATGCTGTTGATGAGATCCAAAATGGGGCTACCTTTGTCAGTGTAGATAAAACTTCAAATCCAAGAGATGGAAGTCCGGCATTGTTGATTCAAGATGATGGTGGTGGCATGGATCCGGAAGCAATGCGACGCTGCATGAGTTTTGGATTTTCAGATAAAAATTCAAAGCTTTCTATTGGACAGTATGGAAATGGCTTCAAGACCAGTAGTATGAGGCTTGGTGCAGATGCTATAGTCTTCAGTCGCCATCTGAATAACGGGATTTTGACTCAAAGCATTGGACTTCTGTCATATACATTTTTGACGCAAACACAACTTGACAGAATAGTAGTACCAATGGTGAATTACGAGTTTAATACATCAACTGGATCATTGGATATGTTAAATGGAAAAGAACATTTTAAGGCGAATTTATCATTGCTGTTGCGCTGGTCACCATATTCATCAGAAGCAGATCTTCTGAAACAATTTGATAACATGGGATCTCACGGCACTAAAGTTATCGTCTACAATTTGTGGCTCAATGATGAAGGGATTACAGAGTTAAATTTTGATACAGATCCCAAGGATATTCGTATTGCTTGGGATATCAAGAAGATTGGTACAAAACCTGCATGGAAGCGAATCCAGGAGGAACATATTGCTAATCGATTTCGCTACTCATTACGTGTGTACCTTTCCATATTGTACTTGCGGTTACCACAAACTTTCCAAATTATATTGAGAGGGCAAGCTGTGAAGCCACATAGCATTGCCGACGATCTTAAACTTGTTGAATTTGTCAAGTATACACCACAATGTGGTGGTGGAGCTGTAGAGGAACTTTTTGTTACAATTGGATTTCTTAAGGAAGCCCCTCATGTCAACATCCATGGTTTCAATGTATATCACAAACATCGGCTGATACTGCCATTTTGGCACGTTGTAAGATATCAAGACAGTAGAGGCAGAGGAGTCGTTGGTATCATGCAAGCGGATTTTGTTGAGCCAACTCATGATAAACAAGATTTCGAGAAAACTTCACTGTTTCAAAAGCTAGAAGCCCGATTGAAGTCGATGACATCGGAATACTGGGATACTCATTGTAGACTTATTGGGTATCGTCCGGCAGCTAAGCCTCAAACTCCAGTTGCCCAATCACATCCACCATTGCAGAAATCACTTGAATATCATAATAAGAGGAAGACAGATGAATTGATAGACCTTCAGAATAGAAAAAAGCATGCAAGTGAAGAATGTGTAACTGGTACTGGTTTCAGTCAGAAGAAACAGATCACCACAACTCCTGCAGACCAGGTCGTTAACCCAGAGACTATAACATTGATGCAAGAAAATAATAAACTACATGCGAATTGTTTGGAATTTGAAAAGAGAGAGGAAGAACTTAATTTAAAGGTGACACAGCTTAGAAGTAAAATAGAGGAAGCCCGGCATGAATATGATCGTCTTTTAGCTGAACTGCATTCACTAGACGTGAAAGAGGAGTAG 1932 0.4146 MGSVEVIDLSSDDESEKVRGIVPVKLEPGAVKQEHRRQAKCGKSQSRATGKDVEENFSGSVPSTGHSNSSVLEQGPSPIDDTGISYASPLCAAPLSRQFWKAGSYDEGHASQIGVKDGKNYLHVHPMFLHSNATSHKWAFGAIAELLDNAVDEIQNGATFVSVDKTSNPRDGSPALLIQDDGGGMDPEAMRRCMSFGFSDKNSKLSIGQYGNGFKTSSMRLGADAIVFSRHLNNGILTQSIGLLSYTFLTQTQLDRIVVPMVNYEFNTSTGSLDMLNGKEHFKANLSLLLRWSPYSSEADLLKQFDNMGSHGTKVIVYNLWLNDEGITELNFDTDPKDIRIAWDIKKIGTKPAWKRIQEEHIANRFRYSLRVYLSILYLRLPQTFQIILRGQAVKPHSIADDLKLVEFVKYTPQCGGGAVEELFVTIGFLKEAPHVNIHGFNVYHKHRLILPFWHVVRYQDSRGRGVVGIMQADFVEPTHDKQDFEKTSLFQKLEARLKSMTSEYWDTHCRLIGYRPAAKPQTPVAQSHPPLQKSLEYHNKRKTDELIDLQNRKKHASEECVTGTGFSQKKQITTTPADQVVNPETITLMQENNKLHANCLEFEKREEELNLKVTQLRSKIEEARHEYDRLLAELHSLDVKEE* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2446 643 MobiDBLite consensus disorder prediction 51 76 - -
Mtr3g2446 643 Coils Coil 540 560 - -
Mtr3g2446 643 MobiDBLite consensus disorder prediction 1 79 - -
Mtr3g2446 643 Pfam Morc6 ribosomal protein S5 domain 2-like 368 506 IPR041006 -
Mtr3g2446 643 Gene3D - 127 318 IPR036890 -
Mtr3g2446 643 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 2 639 IPR045261 GO:0016887
Mtr3g2446 643 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 2 639 - -
Mtr3g2446 643 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 139 344 IPR036890 -
Mtr3g2446 643 Coils Coil 607 641 - -
Mtr3g2446 643 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 141 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2446 Mtr-Chr3 38323735 38337086 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2446 - - gmx:100795667 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3799 4 51767610 51780876 Mtr3g2446 3 38323735 38337086 ECH
Mtr3g2446 3 38323735 38337086 Mtr3g2446 3 38323735 38337086 ECH