Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3790 ATGGATATGAAAGGATATTATTCAGTTTCTTGGACAAACAAATATATGAAAGACTCATTTTTTTCATTTCAACTCACAAGAAGACAACACCAATGCAAACAAGAAAATCATGTTGTCTCAGAACAAACAACTACTTCACTAAATCATTCCCTCAAATTGTCTTCTTCTACTTCCCTAAATACTCTATCACCTATTCTACATCTTTTTGTTACTTTGCTTCTGTTTTTTACCTCAATTAGTCCAATTTTGTCACACCCCATTGTCTCAAATTCAACTTCATCACAAGTACAATCTCACTCCAAGGCTAACCAAACTTTTAGACCAGATGTTGCATTGCATAAATTGAAGAGAATCAGAGCTCATTTGAAGAAAATCAACAAGCTTCCCGTCAAGACAATTAAGAGTCCAGATGGAGATTTGATAGATTGTATTATATCTCATCAACAACCAGCTTTTGACCATCCACTACTCAAAGGACAAAAACCATTGGATCCACCAGAAAGGCCAAAAGGGTACAACAAGAATGGAGAAAATGCAACAAATAACTTTCAGCTTTGGATTGATTCTGGTGAAGAATGTCCTAAAGGAACTGTTCCAATCAGAAGAACAACAGAACAAGATTTTCTTAGAGCAAGCTCCATAAGAAGATTTGGAAGAAAACCAAGAGGTGTACGGAGAGACTCAACAGGCAATGGTCATGAGCATGCAGTTGTTTTTGTAAATGGAGAACAATACTATGGAGCAAAAGCAAGCATAAATGTGTGGACACCAAGGGTAACTGATCAATATGAATTCAGCTTATCACAAATATGGGTTATTGCTGGATCATTTGGTAATGATCTTAATACATTAGAAGCTGGATGGCAGGTAAGTCCTGAGTTATATGGTGATAATTATCCAAGATTCTTTACTTATTGGACAACGGATGCATATCAAGCAACTGGATGTTACAATTTACTATGTTCTGGATTTATTCAAACAAACAATAGAATAGCAATAGGGGCAGCAATCTCCCCAAGATCGTTCTATAGTGGAAGACAATTTGATATTGGCTTAATGATTTGGAAAGACCCAAAACATGGACATTGGTGGCTTGAATTTGGATCAGGGCTATTAGTTGGATATTGGCCAGCAAACTTGTTTAGTCACTTGAGAAGTCATGCAAGCATGGTACAATTTGGAGGTGAAATTGTGAATTCACGTTCAAGAGGCTACCACACTGGCACACAAATGGGAAGTGGGCATTTTTCAGGAGAAGGTTTTAGAAAAGCAGCTTATTTTAGAAACTTACAAGTAGTTGATTGGGACAATAACTTGCTTCCTTTATCAAATATTCACCAATTGGCTGATCATTCAAATTGCTATGATGTAAAAGAGGGAAGAAATAATGTTTGGGGAACTTATTTTTATTATGGAGGTCCTGGAAGGAATGTGAGATGTCCATGA 1446 0.3651 MDMKGYYSVSWTNKYMKDSFFSFQLTRRQHQCKQENHVVSEQTTTSLNHSLKLSSSTSLNTLSPILHLFVTLLLFFTSISPILSHPIVSNSTSSQVQSHSKANQTFRPDVALHKLKRIRAHLKKINKLPVKTIKSPDGDLIDCIISHQQPAFDHPLLKGQKPLDPPERPKGYNKNGENATNNFQLWIDSGEECPKGTVPIRRTTEQDFLRASSIRRFGRKPRGVRRDSTGNGHEHAVVFVNGEQYYGAKASINVWTPRVTDQYEFSLSQIWVIAGSFGNDLNTLEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFIQTNNRIAIGAAISPRSFYSGRQFDIGLMIWKDPKHGHWWLEFGSGLLVGYWPANLFSHLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFSGEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDVKEGRNNVWGTYFYYGGPGRNVRCP* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3790 481 MobiDBLite consensus disorder prediction 154 179 - -
Mtr4g3790 481 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 50 481 - -
Mtr4g3790 481 Pfam Neprosin activation peptide 132 238 IPR025521 -
Mtr4g3790 481 PANTHER CARBOXYL-TERMINAL PEPTIDASE 50 481 - -
Mtr4g3790 481 Pfam Neprosin 263 474 IPR004314 -
Mtr4g3790 481 Gene3D - 254 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3790 Mtr-Chr4 51699609 51703672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3790 - - gmx:100820129 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3790 4 51699609 51703672 Mtr3g2441 3 38247994 38251892 ECH
Mtr4g3790 4 51699609 51703672 Mtr4g3790 4 51699609 51703672 ECH
Mtr4g3790 4 51699609 51703672 Mtr3g2441 3 38247994 38251892 PCT