Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2441 ATGATCATAAAATTCAAACCACTATTCTCTCTCTCTCTCTCTCTCTCTCTCACTATCACTCACTTCTTGGTAATTGTTCTGTTTAGAATTAGAATGGAAGCAAAGGAATACTCAGTTTCCTTGAAAAGACATAGGAAAGAACCATATTTTGTAGCACACCACACAAAAAGACAACACCATATTGCCTCAAAACAAGCATGTACACACAACCATTCTCTCATATTGTCCACTTCTCAAAACACTCCACCTATGCTACCTGTTTTTGTTTCTTTGTTGTTACTTCTTCTTACTTCAACTACTCCAGCATTGTCTCATCACTCTATTGTCTCAGATTCTATCCACCCCTCGAAGACTAACCAGACTTATAAAGCAGGTTCAGAGTTGCTTAAGTTAAGAAGAATCAGAACTCACCTCATGAAAATCAATAAGCCTGCTGTGAAGACAATTCAGAGTCCAGATGGTGATTTGATAGATTGTATTTTATCTCATCATCAACCAGCTTTTGATCATCCTAAGCTTAAAGGGCATAAACCATTGGATCCACCAGAAAGGCCAAATGGATACTACAACAATGGAGAAAAGGTTAGTGAGAGGTTACAGTTGTGGACTGATTCTGGTGAAGAATGTCCAGAAGGAACTGTTCCAATCAGAAGAACAACAGAAGATGATATTCTAAGAGCAAGTTCTATCAAAAGATTTGGAAGGAAACCAAAACCTGTTCGGAGAGATTCAACTAGTAGTGATCATGAGCATGCAATTCTTTTTGTAAATGGAAATCAATACTTTGGAGCAAAGGCAAACATAAATGTGTGGGCACCTCATGTAACAGATGGATATGAATTTAGCTTGTCACAGATATGGGTTATTGCTGGCTCCTTTGGTAATGATCTCAATACCCTAGAAGCTGGTTGGCAGGTAAGTCCAGAACTGTATGGTGACAACTATCCAAGGTTCTTCACTTATTGGACTACAGATGCATATCAAACAACTGGATGCTACAACTTATTGTGTTCAGGCTTTATCCAAACTAATAACAAGATAGCAATAGGGGCAACAATCTCCCCTACATCAGCTTATAACAGTGGACAGTTTGATATTGGTATAATGATTTGGAAGGATCCAAAGCATGGACACTGGTGGTTAGAGTACGGAGGACAATTAGTTGGATACTGGCCAGCAAACATGTTCAGTCACTTGAGGAGTCATGCAAGCATGGTACAATTTGGTGGAGAGATTGTGAATGCTCGTTCTAAGGGTTACCACACTGACACTCAAATGGGAAGTGGCCATTTTGCAGAAGAAGGATTTAAAAAAGCAGCTTATTTTAGAAACTTACAAGTCATTGATTGGGACAATAACTTACTTCCTCTTGCTAATATTCAACATTTGGCTGACCATTCTAGTTGTTATAACATTAAGCAGGGTAATAACAATGTTTGGGGAACTTATTTTTATTATGGAGGTCCTGGAAGGAATGTTAAATGCCCATGA 1491 0.385 MIIKFKPLFSLSLSLSLTITHFLVIVLFRIRMEAKEYSVSLKRHRKEPYFVAHHTKRQHHIASKQACTHNHSLILSTSQNTPPMLPVFVSLLLLLLTSTTPALSHHSIVSDSIHPSKTNQTYKAGSELLKLRRIRTHLMKINKPAVKTIQSPDGDLIDCILSHHQPAFDHPKLKGHKPLDPPERPNGYYNNGEKVSERLQLWTDSGEECPEGTVPIRRTTEDDILRASSIKRFGRKPKPVRRDSTSSDHEHAILFVNGNQYFGAKANINVWAPHVTDGYEFSLSQIWVIAGSFGNDLNTLEAGWQVSPELYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNKIAIGATISPTSAYNSGQFDIGIMIWKDPKHGHWWLEYGGQLVGYWPANMFSHLRSHASMVQFGGEIVNARSKGYHTDTQMGSGHFAEEGFKKAAYFRNLQVIDWDNNLLPLANIQHLADHSSCYNIKQGNNNVWGTYFYYGGPGRNVKCP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2441 496 Pfam Neprosin 280 489 IPR004314 -
Mtr3g2441 496 Gene3D - 273 383 - -
Mtr3g2441 496 Pfam Neprosin activation peptide 148 253 IPR025521 -
Mtr3g2441 496 PANTHER CARBOXYL-TERMINAL PEPTIDASE 62 496 - -
Mtr3g2441 496 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 62 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2441 Mtr-Chr3 38247994 38251892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2441 - - gmx:100782442 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3790 4 51699609 51703672 Mtr3g2441 3 38247994 38251892 ECH
Mtr3g2441 3 38247994 38251892 Mtr3g2441 3 38247994 38251892 ECH
Mtr4g3790 4 51699609 51703672 Mtr3g2441 3 38247994 38251892 PCT