Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3786 ATGTTTGGCATCAAAAGCAAAAGGGAATCATCGATGAAGGAAACAATAAGGTATTTGGCAGGCATTGCAGGGCCTAGTGGTTTTGGCTCAAATTCAACTGCAGAACAAGTCACTCAACATTGCTCTTTATTCATCCCTTCAAATCTAACTGCTCTCATCACTGGTGCTACTTCTGGTATTGGAGCTGAAACGGCTAGGGTGTTGGCAAAAAGAGGAGTAAGAGTTGTGGTTGGTGCCAGAGACATGAAAAAGGCTATGAAAGTGAAAGAAAAAATCCAAGAGGAGAGTCCTTATGCTGAGGTTATTCTATTGGAGATTGATCTTAGCTCTCTTGCTTCTGTACAAAGATTTTGTTCAGAGTTTTTAGCTTTAGAATTGCCCCTTAATATTCTCATAAACAATGCAGGAGTGTACTCTCATAACCTGGAATTCTCCGAAGAGAAAATTGAATTGACATTTGCTACAAATTACTTAGGACATTTTTTGTTAACAAAAATGCTACTGGAGAAAATGATAGATACTGCAAATAAAATAGGCATTCAAGGAAGAATAATAAATATTTCTTCAGTAATTCATAGCTGGGTGAAAAGAAGTTGCTTTTGTTTTAAAGACATGCTCACTGGAAAAAATTACAATGGGACACGTGCATATGCTCAATCCAAATTAGCCATGATTCTGCATGTGAAGGAAATGGCTAGACAACTAAAGGCAAGGAATGCAAGAGTAACTATCAATGCAGTGCATCCAGGCATTGTGAAGACAGGAATTATTAGAGCACATAAGGGCTTAATAACGGATTCCTTGTTTTTTATTGCATCAAAGCTGCTCAAAACGACATCACAGGGTGCATCAACGACTTGTTATGTTGCTCTAAGCCAAAAAACCGAAGGGGTGAGTGGGAAATTCTTTACTGACTGTAACGAGAGTAGCTGCTCAAGACTTGCAAACGACGAATCAGAAGCAAAAAAGCTATGGAACAATACAAATAATTTGCTTCATAAACGACTAAGACAAGCAGCAATTGGAAGTTCTTCTTCCCTCTACTCTTGA 1050 0.3829 MFGIKSKRESSMKETIRYLAGIAGPSGFGSNSTAEQVTQHCSLFIPSNLTALITGATSGIGAETARVLAKRGVRVVVGARDMKKAMKVKEKIQEESPYAEVILLEIDLSSLASVQRFCSEFLALELPLNILINNAGVYSHNLEFSEEKIELTFATNYLGHFLLTKMLLEKMIDTANKIGIQGRIINISSVIHSWVKRSCFCFKDMLTGKNYNGTRAYAQSKLAMILHVKEMARQLKARNARVTINAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKTTSQGASTTCYVALSQKTEGVSGKFFTDCNESSCSRLANDESEAKKLWNNTNNLLHKRLRQAAIGSSSSLYS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3786 349 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 137 IPR002347 -
Mtr4g3786 349 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 182 190 IPR002347 -
Mtr4g3786 349 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 217 236 IPR002347 -
Mtr4g3786 349 PRINTS Glucose/ribitol dehydrogenase family signature 50 67 IPR002347 -
Mtr4g3786 349 PRINTS Glucose/ribitol dehydrogenase family signature 126 137 IPR002347 -
Mtr4g3786 349 PRINTS Glucose/ribitol dehydrogenase family signature 176 192 IPR002347 -
Mtr4g3786 349 PRINTS Glucose/ribitol dehydrogenase family signature 217 236 IPR002347 -
Mtr4g3786 349 PRINTS Glucose/ribitol dehydrogenase family signature 240 257 IPR002347 -
Mtr4g3786 349 Gene3D - 43 337 - -
Mtr4g3786 349 Pfam short chain dehydrogenase 50 191 IPR002347 -
Mtr4g3786 349 Pfam short chain dehydrogenase 209 257 IPR002347 -
Mtr4g3786 349 CDD retinol-DH_like_SDR_c_like 50 325 - -
Mtr4g3786 349 PANTHER RETINOL DEHYDROGENASE 15 339 - -
Mtr4g3786 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 310 IPR036291 -
Mtr4g3786 349 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 15 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3786 Mtr-Chr4 51662099 51665467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3786 28 303 Acyl Lipid Metabolism Gene Families AT3G46170 27.526 1.63e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3786 - K11153 gmx:100819058 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3786 4 51662099 51665467 Mtr4g3786 4 51662099 51665467 ECH
Mtr4g3786 4 51662099 51665467 Mtr3g2439 3 38236910 38240110 PCT