Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3784 ATGGCTCCAAGCTTAACCACCATAAAAGAAACAAATCTTTCCCATGCCAATTCCCTCCCCACCATAAAACTAGAAAACTCAATATTCCTCGCCAATAACAACCCAATCCTCACTCAAGTCCCATCAAACATAACCATTACTCCACCACCTCATAAACACGAAAATTCTTCTTCTCCAAACACCACCGTTGCTGGTTGCTTCGTTGGCTTCAACGCCGACGAACCAAGCAGCCGACACATAGTTTCCATTGGCCACCTCAACGGAATCAGATTCACCAGCATATTCAGATTTAAACTATGGTGGAGTACTCACTGGACAGGAACCAAAGGCAATGACATAGAAAACGAAACTCAAATGATTATACTTGAAAACGACACCGTTAAACAACGTCCCTACGTTCTTCTTTTACCACTCATCGAAGGTTCTTTCAGAGCTTGTCTTCAACCAGGAGAAAACAATAACAACGTGGACATTTGCATGGAAAGTGGATCCACACGTGTTGTTGAATCAACTTTCAAAACATGTTTATACATTCATGCAAACTTCGATCCTTATATATTAATGAACGAAGCGATTAAGGTTGTTAGAGACCACCTTGGAACATTCAAACTTCTAGAAGAAAAAACAATACCTGATATAGTTGATAAATTTGGATGGTGTACATGGGATGCATTTTACCTTAAGGTGGACCCTCAAGGAGTGAAAGAAGGTGTTAAGGGTTTAGTAGAAGGTGGGTGTCCTCCAAGTTTTGTAATCATTGATGATGGTTGGCAAAATTTTTGTCGTGATGATGAAGATTTTTTGAACGGTGGTGATTGTTTAAGTTTGAATTGTTCTATACCTGGCGAACAAATGTTGGGAAGGTTAATAAGTTTTGAAGAAAATAAAAAATTTAAGGAATATGATGAATCTTTAGGTATGGGTGGGTTTGTGAGGGATTTAAAGGAGGAATTTAGGGGTTTATTAAAGGAGGTTTATGTGTGGCATGCTTTTTGTGGGTATTGGGGTGGGATTAGGCCTAATGTTGAAGGGATGCCAGAGTCGGTGATAATGCCGGCGAAGTTGTCACCGGGGGCTGAGAGGTGTATGACGGATTTGGCGGTGGTGAAGATAATGGAGATCGGAGTTGGATTGGTGAAGCCAGAAGAGGCATGCCGGTTGTATGATGGACTTCATTCTCATTTGAAATCTGTTGGTATTGATGGTGTCAAGATTGATGTCACACACGTTCTAGAGATGCTGTCTGAGGAATATGGTGGTCGAGTTGAGCTTGCAAAAGCGTACTACAAGGCACTAACTGATTCCGTGAGGAAACATTTCAAAGGCAATGGTGTCATTTCCAGTATGCAACAATGCAACGATTTCATGTTCCTTGGTACAGAAACCATTTCACTTGGACGAGTTGGTGATGATTTTTGGTGCACGGACCCAGCTGGGGATCCAAATGGTACATATTGGTTGCAAGGATGTCACATGGTGCATTGTGCCTATAACAGCTTATGGATGGGAAATTTTATACAACCAGATTGGGACATGTTCCAATCTCATCATGCTTGTTCTGAATTTCATGCTGCTTCTCGAGCAATCTCTGGCGGACCAATTTATGTAAGCGACTCTGTTGGAAACCACAACTTCAAGTTACTCAAGAAGCTGGTTTTGCCGGATGGATCGATTTTGCGGTGTCAACATTATGCACTTCCAACGAGAGACTCTTTATTTGTAGACCCTTTACATGATGGCAAAACAATGCTCAAAATTTGGAACCTCAACAAATATAGTGGAGTTTTGGGTCTATTCAATTGCCAAGGAGGAGGGTGGTGCCCTGTGACTAGAAGAAACAAAAGTGCTTCTGAGTTTTCGCATTCTGTGACTTGCTTTGCAAGTCCTAAAGACATTGAATGGAGCAAAGGGAACAACCCAATTTGCATCAAAGGTGTTGATGTATTTGCTGTCTACATGTTTAAAGATGAAAAATTGAAGCTGCTTAAATGCACCGAGACTATAGAAGTTTCACTTGAACCTTTTAGTTTTGAGCTCATGACAGTTTCTCCTGTGATGGTCATACCAAAAAATTCAATTCAATTTGCTCCAATTGGATTAGTTAACATGCTCAACTCCGGAGGTTCAATTATGTCATTGGAGTTTGATGAAGAGAAAGATTCGGTGCAAATTGGGGTGAGGGGTCATGGAGAAATGAGGGTGTTTGTATCCGAGAAGCCGGTAAGTTGTATGATTGACGGAGAAGCTGTGAAATTTGATTATGATGATAGCATGGTAATGCTCCATGTCCCTTGGCCTTGTTCTTCAAGGTTGTCAGTGGTTGAGTATTTATTCTGA 2337 0.4112 MAPSLTTIKETNLSHANSLPTIKLENSIFLANNNPILTQVPSNITITPPPHKHENSSSPNTTVAGCFVGFNADEPSSRHIVSIGHLNGIRFTSIFRFKLWWSTHWTGTKGNDIENETQMIILENDTVKQRPYVLLLPLIEGSFRACLQPGENNNNVDICMESGSTRVVESTFKTCLYIHANFDPYILMNEAIKVVRDHLGTFKLLEEKTIPDIVDKFGWCTWDAFYLKVDPQGVKEGVKGLVEGGCPPSFVIIDDGWQNFCRDDEDFLNGGDCLSLNCSIPGEQMLGRLISFEENKKFKEYDESLGMGGFVRDLKEEFRGLLKEVYVWHAFCGYWGGIRPNVEGMPESVIMPAKLSPGAERCMTDLAVVKIMEIGVGLVKPEEACRLYDGLHSHLKSVGIDGVKIDVTHVLEMLSEEYGGRVELAKAYYKALTDSVRKHFKGNGVISSMQQCNDFMFLGTETISLGRVGDDFWCTDPAGDPNGTYWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSHHACSEFHAASRAISGGPIYVSDSVGNHNFKLLKKLVLPDGSILRCQHYALPTRDSLFVDPLHDGKTMLKIWNLNKYSGVLGLFNCQGGGWCPVTRRNKSASEFSHSVTCFASPKDIEWSKGNNPICIKGVDVFAVYMFKDEKLKLLKCTETIEVSLEPFSFELMTVSPVMVIPKNSIQFAPIGLVNMLNSGGSIMSLEFDEEKDSVQIGVRGHGEMRVFVSEKPVSCMIDGEAVKFDYDDSMVMLHVPWPCSSRLSVVEYLF* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3784 778 SUPERFAMILY (Trans)glycosidases 214 561 IPR017853 -
Mtr4g3784 778 Pfam Raffinose synthase or seed imbibition protein Sip1 24 762 IPR008811 -
Mtr4g3784 778 Gene3D Aldolase class I 216 551 IPR013785 -
Mtr4g3784 778 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE-RELATED 1 778 - -
Mtr4g3784 778 PANTHER - 1 778 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3784 Mtr-Chr4 51606714 51611199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3784 1 778 Glycoside Hydrolase AT5G40390 59.924 0.0 987
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3784 K06617 - gmx:100798883 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3784 4 51606714 51611199 Mtr3g2435 3 38186261 38189564 ECH
Mtr4g3784 4 51606714 51611199 Mtr4g3784 4 51606714 51611199 ECH