Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2435 ATGGCACCACCGAGCATAACCAAAACAGCTACACCCATAGATGTAATAGGCCTCGTCGAAATAACTAACCCACCCTTATCCATCACCTTAAATGACTCATGTTTTCTTGCAAATGGCCACCCTTTTCTCACTCAAGTCCCACCCAACATAACAACCACCACCCCTTCCCCTTTTCTCCATAATTCCAAATCCAACTACAATACCACGTTGCAACATGGTTGCTTCGTTGGTTTCAACACCACCGAACCCAAAAGCCACCACGTGGTTCCACTTGGCAAACTCAAAGGAATCCGGTTCATGAGTATATTCCGTTTTAAGGTTTGGTGGACAACTCATTGGACCGGAACCAACGGACATGAGTTAGAACATGAGACACAAATGTTAATCCTTGACCAAAACAAATCACTCGGACGCCCCTATGTTTTACTTCTCCCAATCATCGAAAACTCCTTCAGAACCTCTCTTCAACCAGGTGTCCATGATTACGTGGACATCTGCACAGAGAGTGGTTCAACACATGTCCTCGAGTCCCACTTCAAATCATGTCTTTACATCCACGTCAGCAATGACCCCTACCGTTTAGTAAAAGAAGCAATGAAAGTAATCCGGACCCACTTAGGAACATTCAAGTTACTTCAAGAAAAAACACCACCAAATATCATTGATAAATTCGGTTGGTGCACCTGGGATGCATTTTATTTGAAAGTGCATCCCAAAGGTGTGTGGGAAGGTGTTAAGGGTCTTACAGAGGGTGGGTGTCCTCCAGGTCTAGTCTTAATAGACGATGGTTGGCAATCCATTTGTCATGATGATGATCCAATTACTGACCAAGAAGGTATGAACCGAACCTCAGCTGGGGAACAAATGCCATGTAGGCTAATAAAATATGAAGAAAATTATAAATTTAGAGAATATAAAAGTCCTAAAAATGAATGTAACAAAGGTATGGGTGGTTTTATTAGGGACTTGAAGGAAGAGTTTAAGAGTGTTGAGAATGTTTATGTTTGGCATGCACTTTGTGGGTATTGGGGTGGGGTTAGACCTAAAGTGAAGGGCATGCCCGAAGCTAAGGTTGTTACTCCGAAGCTGTCTCCGGGGCTGAAGATGACAATGGAGGATTTAGCGGTGGATAAGATTGTTAACAATGGTGTAGGGTTAGTGCCACCAAATTTAGCCCAAGAAATGTTTGAAGGGCTTCACTCTCATTTGGAATCGGTGGGCATTGACGGTGTTAAAGTTGACGTTATTCATTTGCTTGAGATGCTATCAGAGGAGTATGGTGGACGTGTTGAGCTTGCTAAAGCCTATTACAAAGCACTGACCTCATCAGTGAAGAAACATTTCAATGGCAATGGAGTTATTGCCAGCATGGAGCATTGCAACGACTTCTTTCTCCTTGGCACAGAAGCCATTTCCCTTGGACGTGTAGGAGATGATTTCTGGTGTTCTGATCCATCTGGTGATCCAAATGGTACATATTGGCTCCAAGGTTGTCACATGGTACATTGTGCCTATAACAGTTTATGGATGGGAAATTTCATTCACCCAGATTGGGACATGTTTCAATCCACTCACCCTTGTGCTGAATTTCATGCTGCCTCTAGAGCTGTCTCTGGTGGACCAATTTATGTTAGCGATTGTGTCGGTAATCACAATTTCAAGTTGCTTAAAACTCTTGTTTTGCCTGATGGTTCTATCTTGCGTTGTCAACATTACGCACTCCCTACACGAGATTGCTTGTTTGAAGACCCTTTACATGATGGCCAAACAATGCTCAAAATTTGGAATCTCAACAAATACACGGGTGTTTTGGGCTTATTCAATTGCCAAGGAGGTGGGTGGTGTCCTGAGACACGACGAAACAAGAGTGCGTCTGAATTTTCACACCTAGTTACATGTTATGCAAGTCCTGAAGATATTGAATGGTGCAATGGTAAAAGCCCAATGTGCATCAAAGGTGTGGATGTGTTTGCTGTGTATTTCTTCAAGGAGAAGAAACTGAAGCTCATGAAGTGTTCCGATAAATTGGAAGTTTCACTCGAGCCATTCAGTTTTGAGCTAATGACAGTGTCTCCAGTGAGGGTGTTTTCAAAAGGGTTGATTCAGTTTGCTCCAATAGGGTTGGTGAACATGCTTAACTCTGGTGGTGCTGTTCAGTCTGTGGAGTTTGATGATCATGCTAGTTTGGTGAAAATTGGGGTGAGGGGTTGTGGGGAAATGAGTGTATTTGCGTCTGAGAAACCAGTTTGTTGCAAAATAGATGGGGTGGCTGTGAAATTTGATTATGTTGACAAAATGGTGAGAGTCCAAATTCCCTGGCCTAGTTCTTCAACTTTGTCTTTGGTTGAGTTTTTATTTTGA 2361 0.4282 MAPPSITKTATPIDVIGLVEITNPPLSITLNDSCFLANGHPFLTQVPPNITTTTPSPFLHNSKSNYNTTLQHGCFVGFNTTEPKSHHVVPLGKLKGIRFMSIFRFKVWWTTHWTGTNGHELEHETQMLILDQNKSLGRPYVLLLPIIENSFRTSLQPGVHDYVDICTESGSTHVLESHFKSCLYIHVSNDPYRLVKEAMKVIRTHLGTFKLLQEKTPPNIIDKFGWCTWDAFYLKVHPKGVWEGVKGLTEGGCPPGLVLIDDGWQSICHDDDPITDQEGMNRTSAGEQMPCRLIKYEENYKFREYKSPKNECNKGMGGFIRDLKEEFKSVENVYVWHALCGYWGGVRPKVKGMPEAKVVTPKLSPGLKMTMEDLAVDKIVNNGVGLVPPNLAQEMFEGLHSHLESVGIDGVKVDVIHLLEMLSEEYGGRVELAKAYYKALTSSVKKHFNGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCSDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAVSGGPIYVSDCVGNHNFKLLKTLVLPDGSILRCQHYALPTRDCLFEDPLHDGQTMLKIWNLNKYTGVLGLFNCQGGGWCPETRRNKSASEFSHLVTCYASPEDIEWCNGKSPMCIKGVDVFAVYFFKEKKLKLMKCSDKLEVSLEPFSFELMTVSPVRVFSKGLIQFAPIGLVNMLNSGGAVQSVEFDDHASLVKIGVRGCGEMSVFASEKPVCCKIDGVAVKFDYVDKMVRVQIPWPSSSTLSLVEFLF* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2435 786 Gene3D Aldolase class I 216 560 IPR013785 -
Mtr3g2435 786 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED 25 786 - -
Mtr3g2435 786 SUPERFAMILY (Trans)glycosidases 220 569 IPR017853 -
Mtr3g2435 786 Pfam Raffinose synthase or seed imbibition protein Sip1 31 767 IPR008811 -
Mtr3g2435 786 PANTHER - 25 786 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2435 Mtr-Chr3 38186261 38189564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2435 1 786 Glycoside Hydrolase AT5G40390 64.232 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2435 K06617 - gmx:100800308 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3784 4 51606714 51611199 Mtr3g2435 3 38186261 38189564 ECH
Mtr3g2435 3 38186261 38189564 Mtr3g2435 3 38186261 38189564 ECH