Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3783 ATGATGGCGAATTTTCCAGCTATGCTTTCTTTGAGGCACTTGCTAGTTTTATCTCTAGCTTTGAATGTTAGCTTGATTCTTAGAATGGTGTATGAAGGTGATGATCAACAAGGAAGCAATAACCAAAACATGGGAAGGATTATTCAAAAATCACGTTTGGTTATACCCTCTACAATTTCTGCTAATTCTACTCGTAAAGATCATGCTGGAGTTATGGATAAAATAATTAACCTAGACCATGGCGACCCAACAATGTACGAACGTTATTGGCGACAAATGGGAGACAAGACCACAATAATAATACCAGGATGGCAATCTATGAGTTATTTTTCTGATCCAACAAGCATTTGTTGGTTTCTTGAGCCAGAATTTTCAAAGGAAGTAGTGAGGTTACATAATGTGGTTGGAAATGCAGTAACACAAGGTCGACACGTTGTTGTTGGAACAGGTTCATCTCAGTTAATTCTTGCTGCTCTTTATGCTCTCTCTTCCCCTCATGCTACTGAACCTATCAGCGTTGTATCTGCCGTACCTTATTACTCGTCCTATCCATCAATGGCAGATTTCCAGAAATCAGGACTATACAAATGGGCTGGAGATGCAGAGAGTTTTAACAAAGATGGTCCTTACATTGAGCTGGTTACTTCTCCTAATAATCCTGATGGATATACAAGGAAATCAGTAGTGAACCGAAACCAAGGACTATTAATCCATGACCTTGCCTATTATTGGCCACAATACACTCCAATACTATTTGCTTCAGATTATGATCTTACTCTTTTCACTGTCTCAAAAAGCACCGGTCACGCTGGAACGCGCATAGGGTGGGCTCTTGTCAAAGATCCTGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTGAATACAATTGGTGTCTCCAAGGATTCTCAACTCAGAGCTGCCAAGGTTTTGAAAGCAGTGTCTGACAGCTGCGAAGAAGAATATTCTCAAGGTGGAGAAGAATCATTTTTCAAGTACAGCTACAAGGCCCTGGAGCAAAGGTGGAAGCTACTGAGAGTAGCAGTTGATAGTGGTGGTTTATTCAGTTTGCCCAAATTTTCTTCTGCATTCTGCACCTTTCTCAATCAAGAGTCGGAGATTCAACCAGCTTTTGCTTGGTTAAAGTGTGAAGGGGATATAGAGGACTGCGGCAGTTTCCTTCGAGGACACAAGATTTTGACTAGAAGTGGTGAACAATTTGGGGCGAGCCCAAAATATGTAAGAATTAGCATGTTGGATACAGATGAACATTTTATGCAGTTGATATATAGGTTAACTACTATACAGAAGTGA 1314 0.4033 MMANFPAMLSLRHLLVLSLALNVSLILRMVYEGDDQQGSNNQNMGRIIQKSRLVIPSTISANSTRKDHAGVMDKIINLDHGDPTMYERYWRQMGDKTTIIIPGWQSMSYFSDPTSICWFLEPEFSKEVVRLHNVVGNAVTQGRHVVVGTGSSQLILAALYALSSPHATEPISVVSAVPYYSSYPSMADFQKSGLYKWAGDAESFNKDGPYIELVTSPNNPDGYTRKSVVNRNQGLLIHDLAYYWPQYTPILFASDYDLTLFTVSKSTGHAGTRIGWALVKDPEVAKKMTKFIELNTIGVSKDSQLRAAKVLKAVSDSCEEEYSQGGEESFFKYSYKALEQRWKLLRVAVDSGGLFSLPKFSSAFCTFLNQESEIQPAFAWLKCEGDIEDCGSFLRGHKILTRSGEQFGASPKYVRISMLDTDEHFMQLIYRLTTIQK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3783 437 Pfam Allinase 76 435 IPR006948 GO:0016846
Mtr4g3783 437 CDD AAT_like 122 432 - -
Mtr4g3783 437 Gene3D - 61 116 IPR037029 GO:0016846
Mtr4g3783 437 SUPERFAMILY PLP-dependent transferases 69 434 IPR015424 -
Mtr4g3783 437 Gene3D Aspartate Aminotransferase, domain 1 328 436 IPR015422 GO:0003824
Mtr4g3783 437 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 436 - -
Mtr4g3783 437 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 436 - -
Mtr4g3783 437 Gene3D - 121 324 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3783 Mtr-Chr4 51581730 51590626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3783 K16903 - gmx:100818522 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3783 4 51581730 51590626 Mtr4g3783 4 51581730 51590626 ECH
Mtr4g3783 4 51581730 51590626 Mtr3g2434 3 38175928 38181830 PCT